Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyOuter membrane efflux proteins (OEP) 8037933 3000246 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyOuter membrane efflux proteins (OEP) 8037933 3000246 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyOuter membrane efflux proteins (OEP) 8037933 3000246 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyGBAA_5634-like 8106452 3002779 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyGBAA_5634-like 8106452 3002779 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AOEPe5nilA1 A: a+b duplicates or obligate multimersX: Outer membrane efflux proteins (OEP) (From Topology)H: Outer membrane efflux proteins (OEP) (From Topology)T: Outer membrane efflux proteins (OEP)F: OEPECOD (1.6)
BOEPe5nilB1 A: a+b duplicates or obligate multimersX: Outer membrane efflux proteins (OEP) (From Topology)H: Outer membrane efflux proteins (OEP) (From Topology)T: Outer membrane efflux proteins (OEP)F: OEPECOD (1.6)
COEPe5nilC1 A: a+b duplicates or obligate multimersX: Outer membrane efflux proteins (OEP) (From Topology)H: Outer membrane efflux proteins (OEP) (From Topology)T: Outer membrane efflux proteins (OEP)F: OEPECOD (1.6)
DHlyD_D23_Ce5nilD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_CECOD (1.6)
D8a0102e5nilD3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: 8a0102ECOD (1.6)
DHlyD_2nde5nilD4 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: HlyD_2ndECOD (1.6)
DBiotin_lipoyl_1e5nilD2 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: Biotin_lipoyl_1ECOD (1.6)
EHlyD_D23_Ce5nilE3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_CECOD (1.6)
E8a0102e5nilE4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: 8a0102ECOD (1.6)
EHlyD_2nde5nilE2 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: HlyD_2ndECOD (1.6)
EBiotin_lipoyl_1e5nilE1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: Biotin_lipoyl_1ECOD (1.6)
FHlyD_D23_Ce5nilF4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_CECOD (1.6)
F8a0102e5nilF3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: 8a0102ECOD (1.6)
FHlyD_2nde5nilF1 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: HlyD_2ndECOD (1.6)
FBiotin_lipoyl_1e5nilF2 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: Biotin_lipoyl_1ECOD (1.6)
GHlyD_D23_Ce5nilG2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_CECOD (1.6)
G8a0102e5nilG4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: 8a0102ECOD (1.6)
GHlyD_2nde5nilG1 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: HlyD_2ndECOD (1.6)
GBiotin_lipoyl_1e5nilG3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: Biotin_lipoyl_1ECOD (1.6)
HHlyD_D23_Ce5nilH4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_CECOD (1.6)
H8a0102e5nilH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: 8a0102ECOD (1.6)
HHlyD_2nde5nilH2 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: HlyD_2ndECOD (1.6)
HBiotin_lipoyl_1e5nilH3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: Biotin_lipoyl_1ECOD (1.6)
IHlyD_D23_Ce5nilI3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: HlyD_D23_CECOD (1.6)
I8a0102e5nilI2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: 8a0102ECOD (1.6)
IHlyD_2nde5nilI4 A: alpha bundlesX: helical hairpin of HlyD-like secretion proteins (From Topology)H: helical hairpin of HlyD-like secretion proteins (From Topology)T: helical hairpin of HlyD-like secretion proteinsF: HlyD_2ndECOD (1.6)
IBiotin_lipoyl_1e5nilI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: Biotin_lipoyl_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF02321Outer membrane efflux protein (OEP)Outer membrane efflux protein- Family
D, E, F, G, H
PF16576Barrel-sandwich domain of CusB or HlyD membrane-fusion (HlyD_D23)Barrel-sandwich domain of CusB or HlyD membrane-fusionThis entry represents a domain comprising the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD. It is formed by a barrel-sandwich domain which is inserted in a RIFT-like domain. The barrel-sandwich domain, itself, contains an in ...Domain
J, K
PF12704MacB-like periplasmic core domain (MacB_PCD)MacB-like periplasmic core domainThis family represents the periplasmic core domain found in a variety of ABC transporters. The structure of this family has been solved for the MacB protein [1]. Some structural similarity was found to the periplasmic domain of the AcrB multidrug eff ...Domain
J, K
PF02687FtsX-like permease C-terminal (FtsX)FtsX-like permease C-terminalThis entry represents the C-terminal helices found in members of the ABC type 3 transporter family of permeases, including Cell division protein FtsX from Gram-negative and Gram-positive bacteria [1], Permease protein MacB [2], Lipoprotein-releasing ...Domain
J, K
PF00005ABC transporter (ABC_tran)ABC transporterABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Outer membrane protein TolC
D, E, F, G, H
Macrolide export protein MacA
J, K
Macrolide export ATP-binding/permease protein MacB

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM