5NJ8 | pdb_00005nj8

Structural basis for aryl hydrocarbon receptor mediated gene activation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DHLHe5nj8D2 A: alpha duplicates or obligate multimersX: HLH-likeH: HLH, helix-loop-helix DNA-binding domain (From Topology)T: HLH, helix-loop-helix DNA-binding domainF: HLHECOD (1.6)
DPAS_11_1e5nj8D1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PAS_11_1ECOD (1.6)
BHLHe5nj8B2 A: alpha duplicates or obligate multimersX: HLH-likeH: HLH, helix-loop-helix DNA-binding domain (From Topology)T: HLH, helix-loop-helix DNA-binding domainF: HLHECOD (1.6)
BPAS_11_1e5nj8B1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PAS_11_1ECOD (1.6)
CHLHe5nj8C2 A: alpha duplicates or obligate multimersX: HLH-likeH: HLH, helix-loop-helix DNA-binding domain (From Topology)T: HLH, helix-loop-helix DNA-binding domainF: HLHECOD (1.6)
CPAS_1e5nj8C1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PAS_1ECOD (1.6)
AHLHe5nj8A2 A: alpha duplicates or obligate multimersX: HLH-likeH: HLH, helix-loop-helix DNA-binding domain (From Topology)T: HLH, helix-loop-helix DNA-binding domainF: HLHECOD (1.6)
APAS_1e5nj8A1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PAS_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B, D
PF00989PAS fold (PAS)PAS foldThe PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs [4]. The PAS fold appears in archaea, eubacteria and eukarya. This domain can bind gases (O2, CO and NO), FAD, 4-hydroxycinnamic acid and NAD+ [5 ...The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs [4]. The PAS fold appears in archaea, eubacteria and eukarya. This domain can bind gases (O2, CO and NO), FAD, 4-hydroxycinnamic acid and NAD+ [5].
Domain
B, D
PF00010Helix-loop-helix DNA-binding domain (HLH)Helix-loop-helix DNA-binding domainDomain
A, C
PF00989PAS fold (PAS)PAS foldThe PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs [4]. The PAS fold appears in archaea, eubacteria and eukarya. This domain can bind gases (O2, CO and NO), FAD, 4-hydroxycinnamic acid and NAD+ [5 ...The PAS fold corresponds to the structural domain that has previously been defined as PAS and PAC motifs [4]. The PAS fold appears in archaea, eubacteria and eukarya. This domain can bind gases (O2, CO and NO), FAD, 4-hydroxycinnamic acid and NAD+ [5].
Domain
A, C
PF00010Helix-loop-helix DNA-binding domain (HLH)Helix-loop-helix DNA-binding domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
F, H
DNA (5'-D(*GP*GP*TP*TP*GP*CP*GP*TP*GP*AP*CP*C)-3')---
E, G
DNA (5'-D(*GP*GP*TP*CP*AP*CP*GP*CP*AP*AP*CP*C)-3')---
B, D
Aryl hydrocarbon receptor nuclear translocator
A, C
Aryl hydrocarbon receptor

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B, D
PharosP27540
A, C
PharosP35869