5O5J | pdb_00005o5j

Structure of the 30S small ribosomal subunit from Mycobacterium smegmatis

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2 Family	Ribosomal protein S6	8066498	4001337	SCOP2 (2022-06-29)
F	SCOP2 Superfamily	Ribosomal protein S6	8066499	3001323	SCOP2 (2022-06-29)
S	SCOP2 Family	Ribosomal protein S19	8086053	4001081	SCOP2 (2022-06-29)
S	SCOP2 Superfamily	Ribosomal protein S19	8086054	3000686	SCOP2 (2022-06-29)
I	SCOP2 Family	Translational machinery components	8082670	4000951	SCOP2 (2022-06-29)
I	SCOP2 Superfamily	Ribosomal protein S5 domain 2-like	8082671	3000100	SCOP2 (2022-06-29)
H	SCOP2 Family	Ribosomal protein S8	8079054	4002027	SCOP2 (2022-06-29)
H	SCOP2 Superfamily	Ribosomal protein S8	8079055	3000709	SCOP2 (2022-06-29)
G	SCOP2 Family	Ribosomal protein S7	8077976	4001112	SCOP2 (2022-06-29)
G	SCOP2 Superfamily	Ribosomal protein S7	8077977	3000799	SCOP2 (2022-06-29)
D	SCOP2 Family	Ribosomal protein S4	8083401	4001399	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	Alpha-L RNA-binding motif	8083402	3001473	SCOP2 (2022-06-29)
U [auth V]	SCOP2 Family	Ribosomal protein S2-like	8063839	4003744	SCOP2 (2022-06-29)
U [auth V]	SCOP2 Superfamily	SIS domain/Ribosomal protein S2-like	8063840	3001397	SCOP2 (2022-06-29)
Q	SCOP2 Family	Cold shock DNA-binding domain-like	8059279	4001909	SCOP2 (2022-06-29)
Q	SCOP2 Superfamily	Nucleic acid-binding proteins	8059280	3000135	SCOP2 (2022-06-29)
O	SCOP2B Superfamily	S15/NS1 RNA-binding domain	8072635	3001284	SCOP2B (2022-06-29)
N	SCOP2 Family	Ribosomal protein S14p/S29e	8059255	4003647	SCOP2 (2022-06-29)
N	SCOP2 Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8059256	3000068	SCOP2 (2022-06-29)
M	SCOP2B Superfamily	S13-like H2TH domain	8096982	3000053	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Nucleic acid-binding proteins	8096978	3000135	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Translational machinery components	8096984	3000571	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Ribosomal protein S10	8096980	3001336	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	Ion_trans_2	e5o5jF1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
S	Ion_trans_2	e5o5jS1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
I	Ion_trans_2	e5o5jI1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
H	Ion_trans_2	e5o5jH1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
G	Ion_trans_2	e5o5jG1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
E	Ribosomal_S5_C	e5o5jE1	A: a/b three-layered sandwiches	X: EV matrix protein	H: EV matrix protein	T: Ribosomal protein S5 domain 2-like	F: Ribosomal_S5_C	ECOD (v294.1)
D	Ion_trans_2	e5o5jD1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
C	Ion_trans_2	e5o5jC1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
U [auth V]	Ion_trans_2	e5o5jV1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
T	Ion_trans_2	e5o5jT1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
R	Ion_trans_2	e5o5jR1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
Q	Ion_trans_2	e5o5jQ1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
P	Ion_trans_2	e5o5jP1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
O	Ion_trans_2	e5o5jO1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
N	Ion_trans_2	e5o5jN1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
M	Ion_trans_2	e5o5jM1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
L	Ion_trans_2	e5o5jL1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
K	Ion_trans_2	e5o5jK1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)
J	Ion_trans_2	e5o5jJ1	A: a/b three-layered sandwiches	X: gH main domain	H: gH main domain	T: gH main domain	F: Ion_trans_2	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
S	3.30.860.10	Alpha Beta	2-Layer Sandwich	30s Ribosomal Protein S19	Chain A	CATH (4.3.0)
I	3.30.230.10	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S5	domain 2	CATH (4.3.0)
H	3.30.1370.30	Alpha Beta	2-Layer Sandwich	Ribosomal Protein S8	Chain: A, domain 1	CATH (4.3.0)
H	3.30.1490.10	Alpha Beta	2-Layer Sandwich	Dna Ligase	domain 1	CATH (4.3.0)
G	1.10.455.10	Mainly Alpha	Orthogonal Bundle	Ribosomal Protein S7	Ribosomal protein S7/S5	CATH (utative)
D	1.10.1050.10	Mainly Alpha	Orthogonal Bundle	Ribosomal Protein S4 Delta 41	Chain A, domain 1	CATH (4.3.0)
D	3.10.290.10	Alpha Beta	Roll	Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region	Chain A	CATH (4.3.0)
C	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
C	3.30.1140.32	Alpha Beta	2-Layer Sandwich	Ribosomal protein S3 C-terminal domain	Ribosomal protein S3, C-terminal domain	CATH (4.3.0)
U [auth V]	3.40.50.10490	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glucose-6-phosphate isomerase like protein	CATH (4.3.0)
U [auth V]	1.10.287.610	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (4.3.0)
T	1.20.58.110	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
R	4.10.640.10	Few Secondary Structures	Irregular	30s Ribosomal Protein S18	Ribosomal protein S18	CATH (4.3.0)
Q	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
O	1.10.287.10	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	S15/NS1, RNA-binding	CATH (4.3.0)
N	4.10.830.10	Few Secondary Structures	Irregular	30s Ribosomal Protein S14	Chain N	CATH (4.3.0)
M	1.10.8.50	Mainly Alpha	Orthogonal Bundle	Helicase, Ruva Protein	domain 3	CATH (4.3.0)
M	4.10.910.10	Few Secondary Structures	Irregular	30s ribosomal protein s13	domain 2	CATH (4.3.0)
L	2.40.50.140	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Nucleic acid-binding proteins	CATH (4.3.0)
K	3.30.420.80	Alpha Beta	2-Layer Sandwich	Nucleotidyltransferase	domain 5	CATH (4.3.0)
J	3.30.70.600	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Ribosomal protein S10	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
S	PF00203	Ribosomal protein S19 (Ribosomal_S19)	Ribosomal protein S19		Domain
I	PF00380	Ribosomal protein S9/S16 (Ribosomal_S9)	Ribosomal protein S9/S16	-	Family
H	PF00410	Ribosomal protein S8 (Ribosomal_S8)	Ribosomal protein S8		Domain
G	PF00177	Ribosomal protein S7p/S5e (Ribosomal_S7)	Ribosomal protein S7p/S5e	This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.	Domain
E	PF03719	Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)	Ribosomal protein S5, C-terminal domain		Domain
E	PF00333	Ribosomal protein S5, N-terminal domain (Ribosomal_S5)	Ribosomal protein S5, N-terminal domain		Domain
D	PF00163	Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)	Ribosomal protein S4/S9 N-terminal domain	-	Family
D	PF01479	S4 domain (S4)	S4 domain	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...	The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.	Domain
C	PF07650	KH domain (KH_2)	KH domain		Domain
C	PF00189	Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)	Ribosomal protein S3, C-terminal domain	This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.	Domain
U [auth V]	PF00318	Ribosomal protein S2 (Ribosomal_S2)	Ribosomal protein S2	-	Family
T	PF01649	Ribosomal protein S20 (Ribosomal_S20p)	Ribosomal protein S20	-	Family
R	PF01084	Ribosomal protein S18 (Ribosomal_S18)	Ribosomal protein S18	-	Family
Q	PF00366	Ribosomal protein S17 (Ribosomal_S17)	Ribosomal protein S17		Domain
P	PF00886	Ribosomal protein S16 (Ribosomal_S16)	Ribosomal protein S16	-	Family
O	PF00312	Ribosomal protein S15 (Ribosomal_S15)	Ribosomal protein S15		Domain
N	PF00253	Ribosomal protein S14p/S29e (Ribosomal_S14)	Ribosomal protein S14p/S29e	-	Family
M	PF00416	Ribosomal protein S13/S18 (Ribosomal_S13)	Ribosomal protein S13/S18	-	Family
L	PF00164	Ribosomal protein S12/S23 (Ribosom_S12_S23)	Ribosomal protein S12/S23	This protein is known as S12 in bacteria and archaea and S23 in eukaryotes.	Domain
K	PF00411	Ribosomal protein S11 (Ribosomal_S11)	Ribosomal protein S11	-	Family
J	PF00338	Ribosomal protein S10p/S20e (Ribosomal_S10)	Ribosomal protein S10p/S20e	This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Conserved domain protein	-	-	-
F	30S ribosomal protein S6	-	-	-
S	30S ribosomal protein S19	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly ribonucleoprotein complex biogenesis organelle assembly protein-containing complex organization membraneless organelle assembly ribosomal small subunit assembly protein-RNA complex assembly ribosomal small subunit biogenesis cellular component organization cellular component biogenesis ribosome biogenesis organelle organization protein-RNA complex organization cellular component assembly protein-containing complex assembly cellular process cellular component organization or biogenesis ribosome assembly biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome cytoplasm
X [auth g]	50S ribosomal protein L31	structural molecule activity structural constituent of ribosome cation binding ion binding binding metal ion binding small molecule binding RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
I	30S ribosomal protein S9	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome cytoplasm
H	30S ribosomal protein S8	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
G	30S ribosomal protein S7	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome
E	30S ribosomal protein S5	RNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome cytoplasm
D	30S ribosomal protein S4	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome
C	30S ribosomal protein S3	RNA binding binding nucleic acid binding mRNA binding rRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
W [auth X]	mRNA fragment	-	-	-
V [auth W]	tRNA-Phe anticodon stem	-	-	-
U [auth V]	30S ribosomal protein S2	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
T	30S ribosomal protein S20	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle ribonucleoprotein complex organelle membraneless organelle ribosome
R	30S ribosomal protein S18 2	RNA binding small ribosomal subunit rRNA binding binding rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
Q	30S ribosomal protein S17	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
P	30S ribosomal protein S16	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome cytoplasm
O	30S ribosomal protein S15	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol
N	30S ribosomal protein S14 type Z	cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding structural molecule activity structural constituent of ribosome RNA binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome cytoplasm
M	30S ribosomal protein S13	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein-containing complex small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle ribonucleoprotein complex organelle membraneless organelle ribosome
L	30S ribosomal protein S12	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome rRNA binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome
K	30S ribosomal protein S11	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
J	30S ribosomal protein S10	RNA binding binding tRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
A	16S rRNA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR013177	Ribosomal protein bS22, C-terminal	Domain
S	IPR005732	Small ribosomal subunit protein uS19, bacteria	Family
S	IPR002222	Small ribosomal subunit protein uS19	Family
S	IPR023575	Small ribosomal subunit protein uS19, superfamily	Homologous Superfamily
S	IPR020934	Small ribosomal subunit protein uS19, conserved site	Conserved Site
X [auth g]	IPR002150	Large ribosomal subunit protein bL31 type A/B	Family
X [auth g]	IPR027491	Large ribosomal subunit protein bL31 type A	Family
X [auth g]	IPR042105	Large ribosomal subunit protein bL31 superfamily	Homologous Superfamily
X [auth g]	IPR034704	Large ribosomal subunit protein bL28/bL31-like superfamily	Homologous Superfamily
I	IPR020574	Small ribosomal subunit protein uS9, conserved site	Conserved Site
I	IPR023035	Small ribosomal subunit protein uS9, bacteria/plastid	Family
I	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
I	IPR000754	Small ribosomal subunit protein uS9	Family
I	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
H	IPR000630	Small ribosomal subunit protein uS8	Family
H	IPR047863	Small ribosomal subunit protein uS8, conserved site	Conserved Site
H	IPR035987	Small ribosomal subunit protein uS8 superfamily	Homologous Superfamily
G	IPR020606	Small ribosomal subunit protein uS7, conserved site	Conserved Site
G	IPR000235	Small ribosomal subunit protein uS7	Family
G	IPR005717	Small ribosomal subunit protein uS7, bacteria/organella	Family
G	IPR036823	Small ribosomal subunit protein uS7 domain superfamily	Homologous Superfamily
G	IPR023798	Small ribosomal subunit protein uS7 domain	Domain
E	IPR000851	Small ribosomal subunit protein uS5	Family
E	IPR005324	Small ribosomal subunit protein uS5, C-terminal	Domain
E	IPR005712	Small ribosomal subunit protein uS5, bacteria	Family
E	IPR013810	Small ribosomal subunit protein uS5, N-terminal	Domain
E	IPR020568	Ribosomal protein uS5 domain 2-type superfamily	Homologous Superfamily
E	IPR018192	Small ribosomal subunit protein uS5, N-terminal, conserved site	Conserved Site
E	IPR014721	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Homologous Superfamily
D	IPR018079	Small ribosomal subunit protein uS4, conserved site	Conserved Site
D	IPR002942	RNA-binding S4 domain	Domain
D	IPR001912	Small ribosomal subunit protein uS4, N-terminal	Domain
D	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
D	IPR022801	Small ribosomal subunit protein uS4	Family
D	IPR005709	Small ribosomal subunit protein uS4, bacteria	Family
C	IPR005704	Small ribosomal subunit protein uS3, bacteria	Family
C	IPR001351	Small ribosomal subunit protein uS3, C-terminal	Domain
C	IPR057258	Small ribosomal subunit protein uS3	Family
C	IPR009019	K homology domain superfamily, prokaryotic type	Homologous Superfamily
C	IPR004087	K Homology domain	Domain
C	IPR004044	K Homology domain, type 2	Domain
C	IPR015946	K homology domain-like, alpha/beta	Homologous Superfamily
C	IPR036419	Ribosomal protein S3, C-terminal domain superfamily	Homologous Superfamily
C	IPR018280	Small ribosomal subunit protein uS3, conserved site	Conserved Site
U [auth V]	IPR005706	Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid	Family
U [auth V]	IPR023591	Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily	Homologous Superfamily
U [auth V]	IPR018130	Small ribosomal subunit protein uS2, conserved site	Conserved Site
U [auth V]	IPR001865	Small ribosomal subunit protein uS2	Family
T	IPR036510	Small ribosomal subunit protein bS20 superfamily	Homologous Superfamily
T	IPR002583	Small ribosomal subunit protein bS20	Family
R	IPR001648	Small ribosomal subunit protein bS18	Family
R	IPR018275	Small ribosomal subunit protein bS18, conserved site	Conserved Site
R	IPR036870	Small ribosomal subunit protein bS18 superfamily	Homologous Superfamily
Q	IPR019984	Small ribosomal subunit protein uS17, bacteria/chloroplast	Family
Q	IPR019979	Small ribosomal subunit protein uS17, conserved site	Conserved Site
Q	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
Q	IPR000266	Small ribosomal subunit protein uS17	Family
P	IPR023803	Small ribosomal subunit protein bS16 domain superfamily	Homologous Superfamily
P	IPR000307	Small ribosomal subunit protein bS16	Family
P	IPR020592	Small ribosomal subunit protein bS16, conserved site	Conserved Site
O	IPR005290	Small ribosomal subunit protein uS15, bacteria	Family
O	IPR009068	uS15/NS1, RNA-binding domain superfamily	Homologous Superfamily
O	IPR000589	Small ribosomal subunit protein uS15	Family
N	IPR023053	Small ribosomal subunit protein uS14, bacteria	Family
N	IPR001209	Small ribosomal subunit protein uS14	Family
N	IPR018271	Small ribosomal subunit protein uS14, conserved site	Conserved Site
N	IPR043140	Small ribosomal subunit protein uS14 superfamily	Homologous Superfamily
M	IPR027437	Small ribosomal subunit protein uS13, C-terminal	Homologous Superfamily
M	IPR001892	Small ribosomal subunit protein uS13	Family
M	IPR018269	Small ribosomal subunit protein uS13, conserved site	Conserved Site
M	IPR010979	Small ribosomal subunit protein uS13-like, H2TH	Homologous Superfamily
M	IPR019980	Small ribosomal subunit protein uS13, bacteria	Family
L	IPR006032	Small ribosomal subunit protein uS12	Family
L	IPR005679	Ribosomal protein uS12, bacteria	Family
L	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
K	IPR001971	Small ribosomal subunit protein uS11	Family
K	IPR036967	Small ribosomal subunit protein uS11 superfamily	Homologous Superfamily
K	IPR019981	Small ribosomal subunit protein uS11, bacteria	Family
K	IPR018102	Small ribosomal subunit protein uS11, conserved site	Conserved Site
J	IPR001848	Small ribosomal subunit protein uS10	Family
J	IPR027486	Small ribosomal subunit protein uS10 domain	Domain
J	IPR036838	Small ribosomal subunit protein uS10 domain superfamily	Homologous Superfamily
J	IPR018268	Small ribosomal subunit protein uS10, conserved site	Conserved Site