Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
DB [auth w]d5oolw_ All alpha proteins Acyl carrier protein-like ACP-like automated matches automated matches (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)
BB [auth u]d5oolu_ Alpha and beta proteins (a+b) Nucleotidyltransferase Nucleotidyltransferase automated matches automated matches (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth K]SCOP2B SuperfamilyRibosomal protein L13 8100460 3001134 SCOP2B (2022-06-29)
M [auth O]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8033689 3000995 SCOP2B (2022-06-29)
HA [auth 9]SCOP2B SuperfamilyMitochondrial ribosomal protein L27-like 8053893 3002240 SCOP2B (2022-06-29)
J [auth L]SCOP2B Superfamily50S Ribosomal protein L14-like 8072072 3000433 SCOP2B (2022-06-29)
Z [auth 1]SCOP2B SuperfamilyZn-binding ribosomal proteins 8075050 3001320 SCOP2B (2022-06-29)
CA [auth 4]SCOP2 FamilyRibosomal protein L36 8083323 4003715 SCOP2 (2022-06-29)
CA [auth 4]SCOP2 SuperfamilyRibosomal protein L36 8083324 3001346 SCOP2 (2022-06-29)
E [auth F]SCOP2B SuperfamilyRibosomal protein L4 8080706 3001146 SCOP2B (2022-06-29)
BB [auth u]SCOP2 FamilyIojap/YbeB-like 8100395 4001878 SCOP2 (2022-06-29)
BB [auth u]SCOP2 SuperfamilyNucleotidyltransferase-like 8100396 3000129 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth K]Ribosomal_L13e5oolK1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
K [auth M]Ribosomal_L27Ae5oolM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
M [auth O]Ribosomal_L17e5oolO1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17ECOD (1.6)
O [auth Q]Ribosomal_L19e5oolQ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
Q [auth S]Ribosomal_L21pe5oolS1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
S [auth U]Ribosomal_L23_2e5oolU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
U [auth W]Ribosomal_L27e5oolW1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
V [auth X]Ribosomal_L28_1e5oolX1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28_1ECOD (1.6)
Y [auth 0]KOG4080e5ool01 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: KOG4080ECOD (1.6)
AA [auth 2]Ribosomal_L34e5ool21 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
DA [auth 5]PDCD9e5ool51 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
HA [auth 9]MRP-L27e5ool91 A: extended segmentsX: Mitochondrial 54S ribosomal protein L27 (From Topology)H: Mitochondrial 54S ribosomal protein L27 (From Topology)T: Mitochondrial 54S ribosomal protein L27F: MRP-L27ECOD (1.6)
JA [auth b]L51_S25_CI-B8e5oolb1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: L51_S25_CI-B8ECOD (1.6)
RA [auth j]EUF08791e5oolj1 A: extended segmentsX: Mitoribosomal protein mL52 (From Topology)H: Mitoribosomal protein mL52 (From Topology)T: Mitoribosomal protein mL52F: EUF08791ECOD (1.6)
SA [auth k]MRP_L53e5oolk1 A: a+b three layersX: Thioredoxin-likeH: Thioredoxin-like (From Topology)T: Thioredoxin-likeF: MRP_L53ECOD (1.6)
UA [auth m]Mitoc_L55e5oolm1 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Mitoc_L55ECOD (1.6)
VA [auth o]MRP-63e5oolo1 A: extended segmentsX: Mitoribosomal protein mL63 (From Topology)H: Mitoribosomal protein mL63 (From Topology)T: Mitoribosomal protein mL63F: MRP-63ECOD (1.6)
XA [auth q]CR6_interacte5oolq1 A: extended segmentsX: Mitochondrial 54S ribosomal protein L25 (From Topology)H: Mitochondrial 54S ribosomal protein L25 (From Topology)T: Mitochondrial 54S ribosomal protein L25F: CR6_interactECOD (1.6)
ZA [auth s]PDCD9e5ools1 A: a/b three-layered sandwichesX: Restriction endonuclease-likeH: Restriction endonuclease-like (From Topology)T: Restriction endonuclease-likeF: PDCD9ECOD (1.6)
CB [auth v]Complex1_LYRe5oolv1 A: alpha bundlesX: LYR protein (From Topology)H: LYR protein (From Topology)T: LYR proteinF: Complex1_LYRECOD (1.6)
DB [auth w]PP-bindinge5oolw1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: PP-bindingECOD (1.6)
J [auth L]Ribosomal_L14e5oolL1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
L [auth N]Ribosomal_L16e5oolN1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
N [auth P]Ribosomal_L18pe5oolP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
P [auth R]Ribosomal_L20e5oolR1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
R [auth T]Ribosomal_L22e5oolT1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
T [auth V]ribosomal_L24_1e5oolV1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
W [auth Y]MRP-L47e5oolY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: MRP-L47ECOD (1.6)
X [auth Z]Ribosomal_L30e5oolZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
Z [auth 1]Ribosomal_L33e5ool11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
BA [auth 3]Ribosomal_L35pe5ool31 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
CA [auth 4]Ribosomal_L36e5ool41 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
C [auth D]Ribosomal_L2e5oolD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2ECOD (1.6)
C [auth D]Ribosomal_L2_Ce5oolD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
EA [auth 6]PBPe5ool61 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: PEBP-likeF: PBPECOD (1.6)
FA [auth 7]TGSe5ool71 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TGSECOD (1.6)
FA [auth 7]tRNA_SADe5ool72 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: ThrRS/AlaRS editing domainF: tRNA_SADECOD (1.6)
GA [auth 8]MRP-L28e5ool81 A: extended segmentsX: Mitochondrial 54S ribosomal protein L28 (From Topology)H: Mitochondrial 54S ribosomal protein L28 (From Topology)T: Mitochondrial 54S ribosomal protein L28F: MRP-L28ECOD (1.6)
IA [auth a]MRP-S32e5oola1 A: extended segmentsX: Mitoribosomal protein mL42 (From Topology)H: Mitoribosomal protein mL42 (From Topology)T: Mitoribosomal protein mL42F: MRP-S32ECOD (1.6)
KA [auth c]Ribonucleas_3_3e5oolc1 A: alpha arraysX: RNase III catalytic domain-like (From Topology)H: RNase III catalytic domain-like (From Topology)T: RNase III catalytic domain-likeF: Ribonucleas_3_3ECOD (1.6)
KA [auth c]dsrme5oolc2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: dsrmECOD (1.6)
LA [auth d]Tim44e5oold1 A: a+b two layersX: Cystatin-likeH: NTF2-like (From Topology)T: NTF2-likeF: Tim44ECOD (1.6)
MA [auth e]MRP-L46e5oole1 A: a+b two layersX: beta-GraspH: Nudix (From Topology)T: NudixF: MRP-L46ECOD (1.6)
D [auth E]Ribosomal_L3e5oolE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
NA [auth f]Ribosomal_S10_2e5oolf1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_2ECOD (1.6)
OA [auth g]Img2e5oolg1 A: a+b two layersX: Glucose permease domain IIB-likeH: eIF1-like (From Topology)T: eIF1-likeF: Img2ECOD (1.6)
PA [auth h]Ribosomal_L50e5oolh1 A: alpha bundlesX: ACP-likeH: Acyl-carrier protein (ACP) (From Topology)T: Acyl-carrier protein (ACP)F: Ribosomal_L50ECOD (1.6)
QA [auth i]MRP-L51e5ooli1 A: alpha bundlesX: Long alpha-hairpinH: Mitoribosomal protein mL51 (From Topology)T: Mitoribosomal protein mL51F: MRP-L51ECOD (1.6)
WA [auth p]RF-1_Ne5oolp1 A: a+b two layersX: dsRBD-likeH: Peptidyl-tRNA hydrolase domain-like (From Topology)T: Peptidyl-tRNA hydrolase domain-likeF: RF-1_NECOD (1.6)
E [auth F]Ribosomal_L4e5oolF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
YA [auth r]Ribosomal_S18e5oolr1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
BB [auth u]RsfSe5oolu1 A: a+b three layersX: Nucleotidyltransferase-likeH: Nucleotidyltransferase (From Topology)T: NucleotidyltransferaseF: RsfSECOD (1.6)
F [auth H]Ribosomal_L9_N_1e5oolH1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_N_1ECOD (1.6)
G [auth I]Ribosomal_L10e5oolI1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
H [auth J]Ribosomal_L11e5oolJ1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
H [auth J]Ribosomal_L11_Ne5oolJ2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
I [auth K]3.90.1180.10 Alpha Beta Alpha-Beta Complex Ribosomal Protein L13p Chain: ACATH (4.3.0)
M [auth O]3.90.1030.10 Alpha Beta Alpha-Beta Complex 50s Ribosomal Protein L17 Chain: A,CATH (utative)
S [auth U]3.30.70.330 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RRM (RNA recognition motif) domainCATH (4.3.0)
U [auth W]2.40.50.100 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domainCATH (4.3.0)
AA [auth 2]1.10.287.3980 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
JA [auth b]3.40.30.10 Alpha Beta 3-Layer(aba) Sandwich Glutaredoxin GlutaredoxinCATH (4.3.0)
SA [auth k]3.40.30.10 Alpha Beta 3-Layer(aba) Sandwich Glutaredoxin GlutaredoxinCATH (4.3.0)
UA [auth m]6.20.130.20 Special Other non-globular Ribosomal Protein L25 Chain PCATH (4.3.0)
XA [auth q]6.10.280.120 Special Helix non-globular Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
J [auth L]2.40.150.20 Mainly Beta Beta Barrel Ribosomal Protein L14 Ribosomal protein L14/L23CATH (4.3.0)
N [auth P]3.30.420.80 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
R [auth T]3.90.470.10 Alpha Beta Alpha-Beta Complex Ribosomal Protein L22 Chain ACATH (4.3.0)
Z [auth 1]2.20.28.120 Mainly Beta Single Sheet Rubrerythrin, domain 2 Ribosomal protein L33CATH (4.3.0)
GA [auth 8]6.10.250.3440 Special Helix non-globular Single alpha-helices involved in coiled-coils or other helix-helix interfaces CATH (4.3.0)
MA [auth e]3.90.79.10 Alpha Beta Alpha-Beta Complex Nucleoside Triphosphate Pyrophosphohydrolase Nucleoside Triphosphate PyrophosphohydrolaseCATH (utative)
OA [auth g]3.30.780.10 Alpha Beta 2-Layer Sandwich Translation Initiation Factor Eif1 SUI1-like domainCATH (4.3.0)
E [auth F]3.40.1370.10 Alpha Beta 3-Layer(aba) Sandwich Ribosomal Protein L4 Chain: ACATH (4.3.0)
F [auth H]3.40.5.10 Alpha Beta 3-Layer(aba) Sandwich Ribosomal Protein L9 domain 1CATH (utative)
G [auth I]3.30.70.1730 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits Ribosomal protein L10, N-terminal RNA-binding domainCATH (4.3.0)
H [auth J]3.30.1550.10 Alpha Beta 2-Layer Sandwich Ribosomal protein L11, N-terminal domain Ribosomal protein L11/L12, N-terminal domainCATH (4.3.0)
H [auth J]1.10.10.250 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Ribosomal protein L11/L12, C-terminal domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth K]PF1078039S ribosomal protein L53/MRP-L53 (MRP_L53)39S ribosomal protein L53/MRP-L53- Family
I [auth K]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
K [auth M]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
M [auth O]PF14978Mitochondrial ribosome protein 63 (MRP-63)Mitochondrial ribosome protein 63- Family
M [auth O]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
O [auth Q]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
Q [auth S]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
S [auth U]PF02410Ribosomal silencing factor during starvation (RsfS)Ribosomal silencing factor during starvation- Family
S [auth U]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
U [auth W]PF00550Phosphopantetheine attachment site (PP-binding)Phosphopantetheine attachment siteA 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...Domain
V [auth X]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
Y [auth 0]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
AA [auth 2]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
DA [auth 5]PF07147Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9)Mitochondrial 28S ribosomal protein S30 (PDCD9)- Family
J [auth L]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
L [auth N]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
N [auth P]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
P [auth R]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
P [auth R]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
R [auth T]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
T [auth V]PF05347Complex 1 protein (LYR family) (Complex1_LYR)Complex 1 protein (LYR family)- Family
T [auth V]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
T [auth V]PF00467KOW motif (KOW)KOW motif- Family
W [auth Y]PF06984Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47)Mitochondrial 39-S ribosomal protein L47 (MRP-L47)- Family
X [auth Z]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
BA [auth 3]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
CA [auth 4]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain
C [auth D]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
C [auth D]PF04280Tim44-like domain (Tim44)Tim44-like domainTim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...Domain
C [auth D]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domainDomain
EA [auth 6]PF01161Phosphatidylethanolamine-binding protein (PBP)Phosphatidylethanolamine-binding proteinDomain
D [auth E]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
D [auth E]PF1178839S mitochondrial ribosomal protein L46 (MRP-L46)39S mitochondrial ribosomal protein L46- Family
E [auth F]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
E [auth F]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth H]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
F [auth H]PF10501Ribosomal subunit 39S (Ribosomal_L50)Ribosomal subunit 39SThe 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ...Domain
G [auth I]PF10244Mitochondrial ribosomal subunit (MRP-L51)Mitochondrial ribosomal subunit- Family
G [auth I]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
H [auth J]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
H [auth J]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
H [auth J]PF18699Mitoribosomal protein mL52 (MRPL52)Mitoribosomal protein mL52- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
mitochondrial tRNAVal---
I [auth K]39S ribosomal protein L13, mitochondrial
K [auth M]39S ribosomal protein L15, mitochondrial
M [auth O]39S ribosomal protein L17, mitochondrial
O [auth Q]39S ribosomal protein L19, mitochondrial
Q [auth S]39S ribosomal protein L21, mitochondrial
S [auth U]39S ribosomal protein L23, mitochondrial
U [auth W]39S ribosomal protein L27, mitochondrial
V [auth X]39S ribosomal protein L28, mitochondrial
Y [auth 0]39S ribosomal protein L32, mitochondrial
AA [auth 2]39S ribosomal protein L34, mitochondrial
DA [auth 5]39S ribosomal protein L37, mitochondrial
HA [auth 9]39S ribosomal protein L41, mitochondrial
JA [auth b]39S ribosomal protein L43, mitochondrial
RA [auth j]39S ribosomal protein L52, mitochondrial
SA [auth k]39S ribosomal protein L53, mitochondrial-
UA [auth m]39S ribosomal protein L55, mitochondrial
VA [auth o]Ribosomal protein 63, mitochondrial
XA [auth q]Growth arrest and DNA damage-inducible proteins-interacting protein 1-
ZA [auth s]39S ribosomal protein S30, mitochondrial
CB [auth v]MIEF1 upstream open reading frame protein
DB [auth w]Acyl carrier protein, mitochondrial
16S ribosomal RNA---
J [auth L]39S ribosomal protein L14, mitochondrial
L [auth N]39S ribosomal protein L16, mitochondrial
N [auth P]39S ribosomal protein L18, mitochondrial
P [auth R]39S ribosomal protein L20, mitochondrial
R [auth T]39S ribosomal protein L22, mitochondrial
T [auth V]39S ribosomal protein L24, mitochondrial
W [auth Y]39S ribosomal protein L47, mitochondrial
X [auth Z]39S ribosomal protein L30, mitochondrial
Z [auth 1]39S ribosomal protein L33, mitochondrial
BA [auth 3]39S ribosomal protein L35, mitochondrial
CA [auth 4]39S ribosomal protein L36, mitochondrial
C [auth D]39S ribosomal protein L2, mitochondrial
EA [auth 6]39S ribosomal protein L38, mitochondrial-
FA [auth 7]39S ribosomal protein L39, mitochondrial
GA [auth 8]39S ribosomal protein L40, mitochondrial
IA [auth a]39S ribosomal protein L42, mitochondrial
KA [auth c]39S ribosomal protein L44, mitochondrial
LA [auth d]39S ribosomal protein L45, mitochondrial
MA [auth e]39S ribosomal protein L46, mitochondrial
D [auth E]39S ribosomal protein L3, mitochondrial
NA [auth f]39S ribosomal protein L48, mitochondrial-
OA [auth g]39S ribosomal protein L49, mitochondrial
PA [auth h]39S ribosomal protein L50, mitochondrial-
QA [auth i]39S ribosomal protein L51, mitochondrial
TA [auth l]39S ribosomal protein L54, mitochondrial
WA [auth p]Peptidyl-tRNA hydrolase ICT1, mitochondrial
E [auth F]39S ribosomal protein L4, mitochondrial
YA [auth r]39S ribosomal protein S18a, mitochondrial
AB [auth t]Unknown protein or protein extension---
BB [auth u]Mitochondrial assembly of ribosomal large subunit protein 1
F [auth H]39S ribosomal protein L9, mitochondrial
G [auth I]39S ribosomal protein L10, mitochondrial
H [auth J]39S ribosomal protein L11, mitochondrial

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth K]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
I [auth K]IPR005822Large ribosomal subunit protein uL13Family
I [auth K]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
I [auth K]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
K [auth M]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
K [auth M]IPR021131Large ribosomal subunit protein uL15/eL18Domain
K [auth M]IPR030878Large ribosomal subunit protein uL15Family
K [auth M]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
M [auth O]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
M [auth O]IPR000456Large ribosomal subunit protein bL17Family
O [auth Q]IPR001857Large ribosomal subunit protein bL19Family
O [auth Q]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
O [auth Q]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth S]IPR028909Large ribosomal subunit protein bL21-likeFamily
Q [auth S]IPR001787Large ribosomal subunit protein bL21Family
Q [auth S]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
S [auth U]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
S [auth U]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
S [auth U]IPR013025Large ribosomal subunit protein uL23-likeFamily
U [auth W]IPR001684Large ribosomal subunit protein bL27Family
V [auth X]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
V [auth X]IPR026569Large ribosomal subunit protein bL28Family
V [auth X]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
Y [auth 0]IPR002677Large ribosomal subunit protein bL32Family
Y [auth 0]IPR051991Mitochondrial ribosomal protein bL32Family
Y [auth 0]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth 2]IPR000271Large ribosomal subunit protein bL34Family
DA [auth 5]IPR052482Mitochondrial large ribosomal subunit mL37Family
DA [auth 5]IPR010793Large ribosomal subunit protein mL37/mL65Family
HA [auth 9]IPR019189Large ribosomal subunit protein mL41Family
JA [auth b]IPR007741Ribosomal protein/NADH dehydrogenase domainDomain
JA [auth b]IPR036249Thioredoxin-like superfamilyHomologous Superfamily
JA [auth b]IPR039927Large ribosomal subunit protein mL43Family
RA [auth j]IPR034596Large ribosomal subunit protein mL52Family
SA [auth k]IPR019716Large ribosomal subunit protein mL53Family
SA [auth k]IPR052473Mitochondrial Large Ribosomal Subunit mL53Family
UA [auth m]IPR044884Large ribosomal subunit protein mL55 superfamilyHomologous Superfamily
UA [auth m]IPR018615Large ribosomal subunit protein mL55Family
VA [auth o]IPR016576Large ribosomal subunit protein mL63Family
XA [auth q]IPR018472Large ribosomal subunit protein mL64Family
XA [auth q]IPR043035Large ribosomal subunit protein mL64 domain superfamilyHomologous Superfamily
ZA [auth s]IPR039982Large ribosomal subunit protein mL65Family
ZA [auth s]IPR010793Large ribosomal subunit protein mL37/mL65Family
CB [auth v]IPR008011Complex 1 LYR protein domainDomain
CB [auth v]IPR045300MIEF1-MP, LYR domainDomain
DB [auth w]IPR006162Phosphopantetheine attachment sitePTM
DB [auth w]IPR036736ACP-like superfamilyHomologous Superfamily
DB [auth w]IPR009081Phosphopantetheine binding ACP domainDomain
DB [auth w]IPR003231Acyl carrier proteinFamily
J [auth L]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
J [auth L]IPR000218Large ribosomal subunit protein uL14Family
L [auth N]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth N]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
L [auth N]IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth N]IPR047873Large ribosomal subunit protein uL16Family
N [auth P]IPR005484Large ribosomal subunit protein uL18Family
N [auth P]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
P [auth R]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
P [auth R]IPR005813Large ribosomal subunit protein bL20Family
R [auth T]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
R [auth T]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth T]IPR001063Large ribosomal subunit protein uL22Family
T [auth V]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
T [auth V]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth V]IPR003256Large ribosomal subunit protein uL24Family
T [auth V]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
T [auth V]IPR005824KOWDomain
T [auth V]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
W [auth Y]IPR038340MRP-L47 superfamily, mitochondrialHomologous Superfamily
W [auth Y]IPR010729Large ribosomal subunit protein uL29m, mitochondrialFamily
X [auth Z]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
X [auth Z]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
X [auth Z]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
Z [auth 1]IPR052008Mitochondrial ribosomal protein bL33Family
Z [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth 1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
Z [auth 1]IPR001705Large ribosomal subunit protein bL33Family
BA [auth 3]IPR021137Large ribosomal subunit protein bL35-likeFamily
BA [auth 3]IPR019338Large ribosomal subunit protein bL35mFamily
BA [auth 3]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
CA [auth 4]IPR000473Large ribosomal subunit protein bL36Family
CA [auth 4]IPR052143Mitochondrial Large Ribosomal Subunit bL36mFamily
CA [auth 4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
C [auth D]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth D]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth D]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth D]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth D]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth D]IPR002171Large ribosomal subunit protein uL2Family
EA [auth 6]IPR036610PEBP-like superfamilyHomologous Superfamily
EA [auth 6]IPR008914Phosphatidylethanolamine-binding proteinFamily
EA [auth 6]IPR035810Phosphatidylethanolamine-binding protein, eukaryoticFamily
FA [auth 7]IPR012676TGS-likeHomologous Superfamily
FA [auth 7]IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyHomologous Superfamily
FA [auth 7]IPR050062Proline-tRNA synthetaseFamily
FA [auth 7]IPR004095TGSDomain
FA [auth 7]IPR012675Beta-grasp domain superfamilyHomologous Superfamily
GA [auth 8]IPR019192Large ribosomal subunit protein mL40Family
GA [auth 8]IPR039145Large ribosomal subunit protein mL40, metazoa/plantsFamily
IA [auth a]IPR019346Large ribosomal subunit protein mL42Family
KA [auth c]IPR036389Ribonuclease III, endonuclease domain superfamilyHomologous Superfamily
KA [auth c]IPR044444Large ribosomal subunit protein mL44, dsRNA binding domain, metazoaDomain
KA [auth c]IPR055189Large ribosomal subunit protein mL44, endonuclease domainDomain
KA [auth c]IPR014720Double-stranded RNA-binding domainDomain
LA [auth d]IPR032710NTF2-like domain superfamilyHomologous Superfamily
LA [auth d]IPR007379Tim44-like domainDomain
LA [auth d]IPR051975Mitochondrial Large Ribosomal Subunit mL45Family
MA [auth e]IPR015797NUDIX hydrolase-like domain superfamilyHomologous Superfamily
MA [auth e]IPR021757Large ribosomal subunit protein mL46, N-terminalDomain
MA [auth e]IPR040008Large ribosomal subunit protein mL46Family
MA [auth e]IPR033650Large ribosomal subunit protein mL46, NUDIX domainDomain
D [auth E]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth E]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
D [auth E]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth E]IPR000597Large ribosomal subunit protein uL3Family
NA [auth f]IPR027486Small ribosomal subunit protein uS10 domainDomain
NA [auth f]IPR027487Large ribosomal subunit protein mL48Family
NA [auth f]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
OA [auth g]IPR007740Large ribosomal subunit protein mL49Family
PA [auth h]IPR018305Large ribosomal subunit protein mL50Family
QA [auth i]IPR019373Large ribosomal subunit protein mL51Family
TA [auth l]IPR013870Large ribosomal subunit protein mL54Family
WA [auth p]IPR052104Mitochondrial Release Factor mL62Family
WA [auth p]IPR000352Peptide chain release factor class IDomain
E [auth F]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth F]IPR002136Large ribosomal subunit protein uL4Family
E [auth F]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
YA [auth r]IPR001648Small ribosomal subunit protein bS18Family
YA [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
BB [auth u]IPR043519Nucleotidyltransferase superfamilyHomologous Superfamily
BB [auth u]IPR004394Protein Iojap/ribosomal silencing factor RsfSFamily
F [auth H]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
F [auth H]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
F [auth H]IPR054302Large ribosomal subunit protein bL9m, C-terminal domainDomain
F [auth H]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
F [auth H]IPR000244Large ribosomal subunit protein bL9Family
G [auth I]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
G [auth I]IPR001790Large ribosomal subunit protein uL10Family
G [auth I]IPR047865Large ribosomal subunit protein uL10, bacterial typeFamily
H [auth J]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
H [auth J]IPR000911Ribosomal protein uL11Family
H [auth J]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
H [auth J]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
H [auth J]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
H [auth J]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
I [auth K]PharosQ9BYD1
K [auth M]PharosQ9P015
M [auth O]PharosQ9NRX2
O [auth Q]PharosP49406
S [auth U]PharosQ16540
U [auth W]PharosQ9P0M9
V [auth X]PharosQ13084
Y [auth 0]PharosQ9BYC8
AA [auth 2]PharosQ9BQ48
DA [auth 5]PharosQ9BZE1
HA [auth 9]PharosQ8IXM3
JA [auth b]PharosQ8N983
RA [auth j]PharosQ86TS9
UA [auth m]PharosQ7Z7F7
VA [auth o]PharosQ9BQC6
XA [auth q]PharosQ8TAE8
ZA [auth s]PharosQ9NP92
CB [auth v]PharosL0R8F8
DB [auth w]PharosO14561
J [auth L]PharosQ6P1L8
L [auth N]PharosQ9NX20
N [auth P]PharosQ9H0U6
P [auth R]PharosQ9BYC9
R [auth T]PharosQ9NWU5
T [auth V]PharosQ96A35
W [auth Y]PharosQ9HD33
X [auth Z]PharosQ8TCC3
Z [auth 1]PharosO75394
BA [auth 3]PharosQ9NZE8
CA [auth 4]PharosQ9P0J6
C [auth D]PharosQ5T653
FA [auth 7]PharosQ9NYK5
GA [auth 8]PharosQ9NQ50
IA [auth a]PharosQ9Y6G3
KA [auth c]PharosQ9H9J2
LA [auth d]PharosQ9BRJ2
D [auth E]PharosP09001
NA [auth f]PharosQ96GC5
OA [auth g]PharosQ13405
PA [auth h]PharosQ8N5N7
QA [auth i]PharosQ4U2R6
TA [auth l]PharosQ6P161
WA [auth p]PharosQ14197
E [auth F]PharosQ9BYD3
YA [auth r]PharosQ9NVS2
BB [auth u]PharosQ96EH3
F [auth H]PharosQ9BYD2
G [auth I]PharosQ7Z7H8
H [auth J]PharosQ9Y3B7