5TBY
HUMAN BETA CARDIAC HEAVY MEROMYOSIN INTERACTING-HEADS MOTIF OBTAINED BY HOMOLOGY MODELING (USING SWISS-MODEL) OF HUMAN SEQUENCE FROM APHONOPELMA HOMOLOGY MODEL (PDB-3JBH), RIGIDLY FITTED TO HUMAN BETA-CARDIAC NEGATIVELY STAINED THICK FILAMENT 3D-RECONSTRUCTION (EMD-2240)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2 Family | Calmodulin-like | 8062874 | 4000924 | SCOP2 (2022-06-29) |
C | SCOP2 Superfamily | EF-hand | 8062875 | 3001983 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | EF-hand | 8062875 | 3001983 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Myosin rod fragments | 8041463 | 3001792 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Myosin rod fragments | 8041463 | 3001792 | SCOP2B (2022-06-29) |
E | SCOP2 Family | Calmodulin-like | 8062890 | 4000924 | SCOP2 (2022-06-29) |
E | SCOP2 Superfamily | EF-hand | 8062891 | 3001983 | SCOP2 (2022-06-29) |
F | SCOP2B Superfamily | EF-hand | 8062891 | 3001983 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | EF-hand_7_8 | e5tbyC2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
C | EF-hand_7_5 | e5tbyC1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
D | EF-hand_7_8 | e5tbyD2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
D | EF-hand_7_5 | e5tbyD1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_5 | ECOD (1.6) |
B | Myosin_N | e5tbyB3 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Myosin_N | ECOD (1.6) |
B | UNK_F_TYPE | e5tbyB1 | A: alpha bundles | X: Spectrin repeat-like | H: Spectrin repeat (From Topology) | T: Spectrin repeat | F: UNK_F_TYPE | ECOD (1.6) |
B | Myosin_head | e5tbyB4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Myosin_head | ECOD (1.6) |
E | EF-hand_7_8 | e5tbyE2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
E | EF-hand_7_4 | e5tbyE1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_4 | ECOD (1.6) |
F | EF-hand_7_8 | e5tbyF1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
F | EF-hand_7_4 | e5tbyF2 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_4 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02736 | Myosin N-terminal SH3-like domain (Myosin_N) | Myosin N-terminal SH3-like domain | This domain has an SH3-like fold. It is found at the N-terminus of many but not all myosins. The function of this domain is unknown. | Domain | |
PF00063 | Myosin head (motor domain) (Myosin_head) | Myosin head (motor domain) | - | Domain | |
PF01576 | Myosin tail (Myosin_tail_1) | Myosin tail | - | Coiled-coil | |
PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050230 | Calmodulin/Myosin light chain/Troponin C-like | Family | |
IPR002048 | EF-hand domain | Domain | |
IPR011992 | EF-hand domain pair | Homologous Superfamily | |
IPR036961 | Kinesin motor domain superfamily | Homologous Superfamily | |
IPR001609 | Myosin head, motor domain-like | Domain | |
IPR000048 | IQ motif, EF-hand binding site | Binding Site | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR014751 | DNA repair protein XRCC4-like, C-terminal | Homologous Superfamily | |
IPR002928 | Myosin tail | Domain | |
IPR004009 | Myosin, N-terminal, SH3-like | Domain | |
IPR008989 | Myosin S1 fragment, N-terminal | Homologous Superfamily | |
IPR002048 | EF-hand domain | Domain | |
IPR011992 | EF-hand domain pair | Homologous Superfamily | |
IPR050403 | Myosin regulatory light chain | Family | |
IPR018247 | EF-Hand 1, calcium-binding site | Binding Site |