5TQY
CryoEM reconstruction of human IKK1, closed conformation 3
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | KOG4250 | e5tqyA1 | A: alpha duplicates or obligate multimers | X: BAR/IMD domain-like | H: Inhibitor of kappaB kinase beta dimerization domain (From Topology) | T: Inhibitor of kappaB kinase beta dimerization domain | F: KOG4250 | ECOD (1.6) |
A | RAWUL_2 | e5tqyA3 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: RAWUL_2 | ECOD (1.6) |
A | Pkinase_Tyr | e5tqyA2 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: Pkinase_Tyr | ECOD (1.6) |
B | KOG4250 | e5tqyB1 | A: alpha duplicates or obligate multimers | X: BAR/IMD domain-like | H: Inhibitor of kappaB kinase beta dimerization domain (From Topology) | T: Inhibitor of kappaB kinase beta dimerization domain | F: KOG4250 | ECOD (1.6) |
B | RAWUL_2 | e5tqyB3 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: RAWUL_2 | ECOD (1.6) |
B | Pkinase_Tyr | e5tqyB2 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: Pkinase_Tyr | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18397 | IQBAL scaffold dimerization domain (IKBKB_SDD) | IQBAL scaffold dimerization domain | This is the C-terminal scaffold dimerization domain (SDD) found in inhibitor of nuclear factor kappa-B kinase subunit beta IKBKB (EC:2.7.11.10) [1]. IKK2 also known as IKBKB is one of the core component of IKB kinases (IKK). IKB kinase (IKK) is an en ... | Domain | |
PF00069 | Protein kinase domain (Pkinase) | Protein kinase domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017441 | Protein kinase, ATP binding site | Binding Site | |
IPR051180 | Inhibitor of nuclear factor kappa-B kinase | Family | |
IPR000719 | Protein kinase domain | Domain | |
IPR022007 | I-kappa-kinase-beta NEMO binding domain | Domain | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR041185 | IKBKB, scaffold dimerization domain | Domain | |
IPR046375 | IKBKB, scaffold dimerization domain superfamily | Homologous Superfamily | |
IPR008271 | Serine/threonine-protein kinase, active site | Active Site |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target | Associated Disease |
---|---|---|
O15111 | :