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Data API
5VA4
|
pdb_00005va4
TRIM-Cyclophilin A B-box 2 and coiled-coil chimera
External Resource: Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
TRIM5/cyclophilin A V4 fusion protein
binding
adenyl ribonucleotide binding
nucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
anion binding
adenyl nucleotide binding
ATP binding
heterocyclic compound binding
carbohydrate derivative binding
ribonucleotide binding
binding
adenyl ribonucleotide binding
nucleotide binding
purine ribonucleotide binding
purine ribonucleoside triphosphate binding
nucleoside phosphate binding
ion binding
purine nucleotide binding
anion binding
adenyl nucleotide binding
ATP binding
heterocyclic compound binding
carbohydrate derivative binding
ribonucleotide binding
small molecule binding
ligase activity, forming carbon-oxygen bonds
aminoacyl-tRNA ligase activity
catalytic activity, acting on RNA
serine-tRNA ligase activity
catalytic activity, acting on a nucleic acid
catalytic activity, acting on a tRNA
catalytic activity
ligase activity
identical protein binding
protein binding
protein homodimerization activity
protein dimerization activity
cation binding
organic acid binding
serine binding
amino acid binding
carboxylic acid binding
RNA binding
tRNA binding
nucleic acid binding
isomerase activity
catalytic activity, acting on a protein
peptidyl-prolyl cis-trans isomerase activity
cis-trans isomerase activity
amide binding
cyclosporin A binding
transition metal ion binding
zinc ion binding
metal ion binding
Less
serine family amino acid metabolic process
small molecule biosynthetic process
oxoacid metabolic process
carboxylic acid metabolic process
selenocysteine biosynthetic process
amino acid metabolic process
primary metabolic process
organic acid biosynthetic process
organic acid metabolic process
alpha-amino acid metabolic process
carboxylic acid biosynthetic process
selenocysteine metabolic process
amino acid biosynthetic process
biosynthetic process
serine family amino acid metabolic process
small molecule biosynthetic process
oxoacid metabolic process
carboxylic acid metabolic process
selenocysteine biosynthetic process
amino acid metabolic process
primary metabolic process
organic acid biosynthetic process
organic acid metabolic process
alpha-amino acid metabolic process
carboxylic acid biosynthetic process
selenocysteine metabolic process
amino acid biosynthetic process
biosynthetic process
small molecule metabolic process
metabolic process
cellular process
serine family amino acid biosynthetic process
alpha-amino acid biosynthetic process
amino acid activation
tRNA aminoacylation
RNA metabolic process
translation
gene expression
tRNA aminoacylation for protein translation
macromolecule biosynthetic process
nucleic acid metabolic process
tRNA metabolic process
nucleobase-containing compound metabolic process
seryl-tRNA aminoacylation
macromolecule metabolic process
protein metabolic process
protein folding
protein maturation
apoptotic process
cell death
programmed cell death
Less
cellular anatomical structure
intracellular anatomical structure
cytoplasm
extracellular region
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR045864
Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)
Homologous Superfamily
A
IPR042103
Serine-tRNA synthetase, type1, N-terminal domain superfamily
Homologous Superfamily
A
IPR002317
Serine-tRNA ligase, type1
Family
A
IPR015866
Serine-tRNA synthetase, type1, N-terminal
Domain
A
IPR006195
Aminoacyl-tRNA synthetase, class II
Domain
A
IPR002314
Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Domain
A
IPR010978
Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm
Homologous Superfamily
A
IPR033729
Serine-tRNA ligase catalytic core domain
Domain
A
IPR017907
Zinc finger, RING-type, conserved site
Conserved Site
A
IPR029000
Cyclophilin-like domain superfamily
Homologous Superfamily
A
IPR002130
Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
Domain
A
IPR000315
B-box-type zinc finger
Domain
A
IPR027370
Zinc finger, RING-type, eukaryotic
Domain
A
IPR013083
Zinc finger, RING/FYVE/PHD-type
Homologous Superfamily
A
IPR001841
Zinc finger, RING-type
Domain
A
IPR020892
Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
Conserved Site
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