Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyClass A (rhodopsin) G protein-coupled receptor-like 8070799 4001858 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyG protein-coupled receptor-like 8070800 3000473 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyLysozyme-like 8033861 3001879 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyG protein-coupled receptor-like 8070800 3000473 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyG protein-coupled receptor-like 8070800 3000473 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyLysozyme-like 8033861 3001879 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyG protein-coupled receptor-like 8070800 3000473 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AArrestin_Ce5w0pA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Arrestin_CECOD (1.6)
AArrestin_Ne5w0pA3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Arrestin_NECOD (1.6)
A7tm_1e5w0pA2 A: alpha bundlesX: Family A G protein-coupled receptor-like (From Topology)H: Family A G protein-coupled receptor-like (From Topology)T: Family A G protein-coupled receptor-likeF: 7tm_1ECOD (1.6)
APhage_lysozyme_2e5w0pA4 A: a+b complex topologyX: Lysozyme-like (From Homology)H: Lysozyme-likeT: Lysozyme-likeF: Phage_lysozyme_2ECOD (1.6)
BArrestin_Ce5w0pB3 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Arrestin_CECOD (1.6)
BArrestin_Ne5w0pB4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Arrestin_NECOD (1.6)
B7tm_1e5w0pB1 A: alpha bundlesX: Family A G protein-coupled receptor-like (From Topology)H: Family A G protein-coupled receptor-like (From Topology)T: Family A G protein-coupled receptor-likeF: 7tm_1ECOD (1.6)
DArrestin_Ce5w0pD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Arrestin_CECOD (1.6)
DArrestin_Ne5w0pD4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Arrestin_NECOD (1.6)
D7tm_1e5w0pD2 A: alpha bundlesX: Family A G protein-coupled receptor-like (From Topology)H: Family A G protein-coupled receptor-like (From Topology)T: Family A G protein-coupled receptor-likeF: 7tm_1ECOD (1.6)
DPhage_lysozyme_2e5w0pD3 A: a+b complex topologyX: Lysozyme-like (From Homology)H: Lysozyme-likeT: Lysozyme-likeF: Phage_lysozyme_2ECOD (1.6)
CArrestin_Ce5w0pC2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Arrestin_CECOD (1.6)
CArrestin_Ne5w0pC4 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Arrestin_NECOD (1.6)
C7tm_1e5w0pC1 A: alpha bundlesX: Family A G protein-coupled receptor-like (From Topology)H: Family A G protein-coupled receptor-like (From Topology)T: Family A G protein-coupled receptor-likeF: 7tm_1ECOD (1.6)
CPhage_lysozyme_2e5w0pC3 A: a+b complex topologyX: Lysozyme-like (From Homology)H: Lysozyme-likeT: Lysozyme-likeF: Phage_lysozyme_2ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00339Arrestin (or S-antigen), N-terminal domain (Arrestin_N)Arrestin (or S-antigen), N-terminal domainIg-like beta-sandwich fold. Scop reports duplication with C-terminal domain.Domain
A, B
PF00959Phage lysozyme (Phage_lysozyme)Phage lysozymeThis family includes lambda phage lysozyme and E. coli endolysin.Domain
A, B
PF000017 transmembrane receptor (rhodopsin family) (7tm_1)7 transmembrane receptor (rhodopsin family)- Family
A, B
PF02752Arrestin (or S-antigen), C-terminal domain (Arrestin_C)Arrestin (or S-antigen), C-terminal domainIg-like beta-sandwich fold. Scop reports duplication with N-terminal domain.Domain
A, B
PF10413Amino terminal of the G-protein receptor rhodopsin (Rhodopsin_N)Amino terminal of the G-protein receptor rhodopsinRhodopsin is the archetypal G-protein-coupled receptor. Such receptors participate in virtually all physiological processes, as signalling molecules. They utilise heterotrimeric guanosine triphosphate (GTP)-binding proteins to transduce extracellular ...Rhodopsin is the archetypal G-protein-coupled receptor. Such receptors participate in virtually all physiological processes, as signalling molecules. They utilise heterotrimeric guanosine triphosphate (GTP)-binding proteins to transduce extracellular signals to intracellular events. Rhodopsin is important because of the pivotal role it plays in visual signal transduction. Rhodopsin is a dimeric transmembrane protein and its intradiskal surface consists of this amino terminal domain and three loops connecting six of the seven transmembrane helices. The N-terminus is a compact domain of alpha-helical regions with breaks and bends at proline residues outside the membrane [1]. The transmembrane part of rhodopsin is represented by 7tm_1 (Pfam:PF00001). The N-terminal domain is extracellular is and is necessary for successful dimerisation and molecular stability [2].
Domain
C, D
PF00339Arrestin (or S-antigen), N-terminal domain (Arrestin_N)Arrestin (or S-antigen), N-terminal domainIg-like beta-sandwich fold. Scop reports duplication with C-terminal domain.Domain
C, D
PF00959Phage lysozyme (Phage_lysozyme)Phage lysozymeThis family includes lambda phage lysozyme and E. coli endolysin.Domain
C, D
PF000017 transmembrane receptor (rhodopsin family) (7tm_1)7 transmembrane receptor (rhodopsin family)- Family
C, D
PF02752Arrestin (or S-antigen), C-terminal domain (Arrestin_C)Arrestin (or S-antigen), C-terminal domainIg-like beta-sandwich fold. Scop reports duplication with N-terminal domain.Domain
C, D
PF10413Amino terminal of the G-protein receptor rhodopsin (Rhodopsin_N)Amino terminal of the G-protein receptor rhodopsinRhodopsin is the archetypal G-protein-coupled receptor. Such receptors participate in virtually all physiological processes, as signalling molecules. They utilise heterotrimeric guanosine triphosphate (GTP)-binding proteins to transduce extracellular ...Rhodopsin is the archetypal G-protein-coupled receptor. Such receptors participate in virtually all physiological processes, as signalling molecules. They utilise heterotrimeric guanosine triphosphate (GTP)-binding proteins to transduce extracellular signals to intracellular events. Rhodopsin is important because of the pivotal role it plays in visual signal transduction. Rhodopsin is a dimeric transmembrane protein and its intradiskal surface consists of this amino terminal domain and three loops connecting six of the seven transmembrane helices. The N-terminus is a compact domain of alpha-helical regions with breaks and bends at proline residues outside the membrane [1]. The transmembrane part of rhodopsin is represented by 7tm_1 (Pfam:PF00001). The N-terminal domain is extracellular is and is necessary for successful dimerisation and molecular stability [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Endolysin,Rhodopsin,S-arrestin
C, D
Endolysin,Rhodopsin,S-arrestin

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR052619Bacteriophage lysozyme-likeFamily
A, B
IPR001165T4-type lysozymeFamily
A, B
IPR034690Endolysin T4 typeFamily
A, B
IPR002196Glycoside hydrolase, family 24Family
A, B
IPR023347Lysozyme domain superfamilyHomologous Superfamily
A, B
IPR023346Lysozyme-like domain superfamilyHomologous Superfamily
A, B
IPR027430Visual pigments (opsins) retinal binding siteBinding Site
A, B
IPR000276G protein-coupled receptor, rhodopsin-likeFamily
A, B
IPR050125G-protein coupled receptor opsinsFamily
A, B
IPR017452GPCR, rhodopsin-like, 7TMDomain
A, B
IPR000732RhodopsinFamily
A, B
IPR019477Rhodopsin, N-terminalDomain
A, B
IPR001760OpsinFamily
A, B
IPR017864Arrestin, conserved siteConserved Site
A, B
IPR000698ArrestinFamily
A, B
IPR011021Arrestin-like, N-terminalDomain
A, B
IPR011022Arrestin C-terminal-like domainDomain
A, B
IPR014753Arrestin, N-terminalHomologous Superfamily
A, B
IPR014756Immunoglobulin E-setHomologous Superfamily
A, B
IPR014752Arrestin-like, C-terminalHomologous Superfamily
C, D
IPR052619Bacteriophage lysozyme-likeFamily
C, D
IPR001165T4-type lysozymeFamily
C, D
IPR034690Endolysin T4 typeFamily
C, D
IPR002196Glycoside hydrolase, family 24Family
C, D
IPR023347Lysozyme domain superfamilyHomologous Superfamily
C, D
IPR023346Lysozyme-like domain superfamilyHomologous Superfamily
C, D
IPR027430Visual pigments (opsins) retinal binding siteBinding Site
C, D
IPR000276G protein-coupled receptor, rhodopsin-likeFamily
C, D
IPR050125G-protein coupled receptor opsinsFamily
C, D
IPR017452GPCR, rhodopsin-like, 7TMDomain
C, D
IPR000732RhodopsinFamily
C, D
IPR019477Rhodopsin, N-terminalDomain
C, D
IPR001760OpsinFamily
C, D
IPR017864Arrestin, conserved siteConserved Site
C, D
IPR000698ArrestinFamily
C, D
IPR011021Arrestin-like, N-terminalDomain
C, D
IPR011022Arrestin C-terminal-like domainDomain
C, D
IPR014753Arrestin, N-terminalHomologous Superfamily
C, D
IPR014756Immunoglobulin E-setHomologous Superfamily
C, D
IPR014752Arrestin-like, C-terminalHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, B
PharosP08100
C, D
PharosP08100

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D
PDBTMAnnotated as membrane protein by PDBTM

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A, B
SEP Parent Component: SER

RESIDAA0037

PSI-MOD :  O-phospho-L-serine MOD:00046
A, B
TPO Parent Component: THR

RESIDAA0037 , AA0038

PSI-MOD :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047
C, D
SEP Parent Component: SER

RESIDAA0037 , AA0038 , AA0037

PSI-MOD :  O-phospho-L-serine MOD:00046 , O-phospho-L-threonine MOD:00047 , O-phospho-L-serine MOD:00046