5W5E
Re-refinement of the pyocin tube structure
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
AA [auth a] | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
BA [auth b] | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
CA [auth c] | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
DA [auth d] | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
P | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
Q | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
R | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
S | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
T | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
U | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
V | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
W | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
X | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
Y | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
Z | SCOP2B Superfamily | T6SS-like | 8091257 | 3000580 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Phage_tube | e5w5eA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
AA [auth a] | Phage_tube | e5w5ea1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
B | Phage_tube | e5w5eB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
BA [auth b] | Phage_tube | e5w5eb1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
C | Phage_tube | e5w5eC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
CA [auth c] | Phage_tube | e5w5ec1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
D | Phage_tube | e5w5eD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
DA [auth d] | Phage_tube | e5w5ed1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
E | Phage_tube | e5w5eE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
F | Phage_tube | e5w5eF1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
G | Phage_tube | e5w5eG1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
H | Phage_tube | e5w5eH1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
I | Phage_tube | e5w5eI1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
J | Phage_tube | e5w5eJ1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
K | Phage_tube | e5w5eK1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
L | Phage_tube | e5w5eL1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
M | Phage_tube | e5w5eM1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
N | Phage_tube | e5w5eN1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
O | Phage_tube | e5w5eO1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
P | Phage_tube | e5w5eP1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
Q | Phage_tube | e5w5eQ1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
R | Phage_tube | e5w5eR1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
S | Phage_tube | e5w5eS1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
T | Phage_tube | e5w5eT1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
U | Phage_tube | e5w5eU1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
V | Phage_tube | e5w5eV1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
W | Phage_tube | e5w5eW1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
X | Phage_tube | e5w5eX1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
Y | Phage_tube | e5w5eY1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
Z | Phage_tube | e5w5eZ1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Phage tail proteins | F: Phage_tube | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04985 | Phage tail tube protein FII (Phage_tube) | Phage tail tube protein FII | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006498 | Tail tube protein | Family | |
IPR052042 | Bacteriophage Tail Sheath Structural Protein | Family |