5XOJ | pdb_00005xoj

Crystal structure of Xpo1p-PKI-Nup42p-Gsp1p-GTP complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AKOW5_SPT5e5xojA1 A: alpha bundlesX: TIM beta/alpha-barrelH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: KOW5_SPT5ECOD (develop294)
B [auth C]KOW5_SPT5e5xojC1 A: alpha bundlesX: TIM beta/alpha-barrelH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: KOW5_SPT5ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.50.300 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold P-loop containing nucleotide triphosphate hydrolasesCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth C]PF08389Exportin 1-like protein (Xpo1)Exportin 1-like protein- Repeat
B [auth C]PF18784CRM1 / Exportin repeat 2 (CRM1_repeat_2)CRM1 / Exportin repeat 2- Repeat
B [auth C]PF18777Chromosome region maintenance or exportin repeat (CRM1_repeat)Chromosome region maintenance or exportin repeat- Repeat
B [auth C]PF18787CRM1 / Exportin repeat 3 (CRM1_repeat_3)CRM1 / Exportin repeat 3- Repeat
B [auth C]PF03810Importin-beta N-terminal domain (IBN_N)Importin-beta N-terminal domain- Repeat
B [auth C]PF08767CRM1 C terminal (CRM1_C)CRM1 C terminal- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
GTP-binding nuclear protein---
B [auth C]Exportin-1
C [auth D]cAMP-dependent protein kinase inhibitor alpha
D [auth E],
E [auth F],
F [auth G]
Nup42p---