5XR1 | pdb_00005xr1

Structure of FLN IG21 domain in complex with C-terminal peptide of beta-2

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	E set domains	8055043	3000070	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Filamin	e5xr1A1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Filamin	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00630	Filamin/ABP280 repeat (Filamin)	Filamin/ABP280 repeat		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	C-terminal peptide of Integrin beta-2,Filamin-A IG21 domain	amyloid-beta binding binding peptide binding protein binding heat shock protein binding opsonin binding complement component C3b binding complement binding cation binding ion binding metal ion binding small molecule binding cell adhesion molecule binding ICAM-3 receptor activity amyloid-beta binding binding peptide binding protein binding heat shock protein binding opsonin binding complement component C3b binding complement binding cation binding ion binding metal ion binding small molecule binding cell adhesion molecule binding ICAM-3 receptor activity molecular transducer activity transmembrane signaling receptor activity signaling receptor activity protein-containing complex binding integrin binding signaling receptor binding kinase binding enzyme binding protein kinase binding small GTPase binding GTPase binding cytoskeletal protein binding actin binding actin filament binding cadherin binding potassium channel regulator activity channel regulator activity ion channel regulator activity molecular function regulator activity transporter regulator activity immunoglobulin receptor binding Fc-gamma receptor I complex binding molecular sequestering activity protein sequestering activity RNA binding nucleic acid binding transmembrane transporter binding identical protein binding protein homodimerization activity protein dimerization activity SMAD binding transcription factor binding DNA-binding transcription factor binding G protein-coupled receptor binding	regulation of biosynthetic process regulation of nitric oxide biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process reactive nitrogen species metabolic process nitric oxide metabolic process positive regulation of metabolic process nitric oxide biosynthetic process biosynthetic process positive regulation of biosynthetic process cellular process metabolic process regulation of biosynthetic process regulation of nitric oxide biosynthetic process regulation of biological process regulation of cellular process biological regulation positive regulation of biological process reactive nitrogen species metabolic process nitric oxide metabolic process positive regulation of metabolic process nitric oxide biosynthetic process biosynthetic process positive regulation of biosynthetic process cellular process metabolic process regulation of nitric oxide metabolic process positive regulation of nitric oxide biosynthetic process regulation of metabolic process positive regulation of cellular process reactive oxygen species metabolic process regulation of superoxide metabolic process positive regulation of reactive oxygen species metabolic process superoxide metabolic process superoxide anion generation positive regulation of superoxide anion generation regulation of superoxide anion generation regulation of reactive oxygen species metabolic process membrane organization import into cell transport establishment of localization vesicle-mediated transport cellular component organization localization phagocytosis, engulfment membrane invagination phagocytosis cellular component organization or biogenesis endocytosis plasma membrane invagination receptor internalization receptor-mediated endocytosis endothelial cell migration cell migration cell motility regulation of protein modification process regulation of protein phosphorylation peptidyl-tyrosine modification regulation of primary metabolic process peptidyl-amino acid modification phosphate-containing compound metabolic process protein metabolic process protein modification process phosphorus metabolic process protein phosphorylation phosphorylation regulation of protein metabolic process regulation of peptidyl-tyrosine phosphorylation primary metabolic process regulation of macromolecule metabolic process macromolecule modification regulation of phosphorylation regulation of phosphorus metabolic process macromolecule metabolic process peptidyl-tyrosine phosphorylation cell chemotaxis cellular response to stimulus chemotaxis response to stimulus neutrophil chemotaxis response to external stimulus neutrophil migration granulocyte migration leukocyte migration cellular response to chemical stimulus taxis immune system process granulocyte chemotaxis response to chemical myeloid leukocyte migration leukocyte chemotaxis locomotion apoptotic process cell death programmed cell death signaling cell-cell signaling cell communication cellular extravasation defense response response to stress inflammatory response leukocyte migration involved in inflammatory response cellular response to low-density lipoprotein particle stimulus response to endogenous stimulus response to lipoprotein particle cellular response to lipoprotein particle stimulus cell adhesion negative regulation of dopamine metabolic process regulation of amine metabolic process negative regulation of metabolic process negative regulation of biological process dopamine metabolic process catechol-containing compound metabolic process amine metabolic process catecholamine metabolic process phenol-containing compound metabolic process negative regulation of cellular process negative regulation of amine metabolic process regulation of catecholamine metabolic process biogenic amine metabolic process regulation of dopamine metabolic process cell-cell adhesion leukocyte cell-cell adhesion heterotypic cell-cell adhesion regulation of immune effector process neutrophil activation multicellular organismal process regulation of localization regulation of myeloid leukocyte mediated immunity positive regulation of leukocyte mediated immunity regulated exocytosis cell activation involved in immune response leukocyte degranulation myeloid leukocyte mediated immunity myeloid leukocyte activation neutrophil activation involved in immune response positive regulation of leukocyte degranulation positive regulation of regulated secretory pathway positive regulation of immune response establishment of localization in cell leukocyte mediated immunity regulation of immune system process positive regulation of immune system process immune response immune effector process regulation of secretion regulation of leukocyte mediated immunity exocytosis regulation of response to stimulus positive regulation of myeloid leukocyte mediated immunity regulation of immune response cellular localization positive regulation of secretion by cell positive regulation of exocytosis leukocyte activation regulation of regulated secretory pathway positive regulation of response to stimulus neutrophil mediated immunity secretion by cell regulation of secretion by cell positive regulation of secretion regulation of neutrophil degranulation leukocyte activation involved in immune response neutrophil degranulation positive regulation of immune effector process regulation of leukocyte degranulation secretion regulation of transport cell activation export from cell regulation of vesicle-mediated transport myeloid cell activation involved in immune response positive regulation of transport regulation of exocytosis positive regulation of neutrophil degranulation granulocyte activation receptor clustering macromolecule localization intracellular protein localization localization within membrane protein localization to membrane macrophage activation leukocyte activation involved in inflammatory response microglial cell activation glial cell activation neuroinflammatory response establishment of protein localization regulation of protein localization protein targeting positive regulation of establishment of protein localization regulation of protein targeting to membrane establishment of protein localization to membrane regulation of establishment of protein localization protein targeting to membrane regulation of cellular localization regulation of protein targeting positive regulation of protein targeting to membrane cell-matrix adhesion cell-substrate adhesion developmental process formation of primary germ layer cellular developmental process embryonic morphogenesis tissue development embryo development gastrulation anatomical structure morphogenesis multicellular organism development endoderm development cell differentiation anatomical structure development anatomical structure formation involved in morphogenesis endoderm formation endodermal cell differentiation amyloid-beta clearance integrin-mediated signaling pathway cell surface receptor signaling pathway signal transduction cell adhesion mediated by integrin regulation of developmental process regulation of cell shape cell morphogenesis regulation of cell morphogenesis regulation of biological quality regulation of anatomical structure morphogenesis angiogenesis regulation of vasculature development positive regulation of developmental process tube morphogenesis regulation of multicellular organismal process blood vessel development system development regulation of multicellular organismal development blood vessel morphogenesis tube development positive regulation of angiogenesis vasculature development circulatory system development positive regulation of vasculature development regulation of angiogenesis positive regulation of multicellular organismal process positive regulation of cell adhesion regulation of cell adhesion positive regulation of leukocyte cell-cell adhesion positive regulation of leukocyte adhesion to vascular endothelial cell regulation of leukocyte adhesion to vascular endothelial cell positive regulation of cell-cell adhesion leukocyte adhesion to vascular endothelial cell regulation of leukocyte cell-cell adhesion regulation of cell-cell adhesion regulation of protein stability protein stabilization cardiac muscle cell membrane repolarization regulation of action potential regulation of membrane repolarization during action potential membrane repolarization membrane repolarization during cardiac muscle cell action potential regulation of cardiac muscle cell membrane repolarization action potential membrane repolarization during action potential regulation of membrane repolarization during cardiac muscle cell action potential regulation of membrane repolarization cardiac muscle cell action potential regulation of membrane potential regulation of body fluid levels wound healing homotypic cell-cell adhesion hemostasis platelet aggregation blood coagulation coagulation response to wounding platelet activation protein localization to cell periphery protein localization to plasma membrane positive regulation of substrate adhesion-dependent cell spreading regulation of cell-substrate adhesion regulation of substrate adhesion-dependent cell spreading positive regulation of cell-substrate adhesion substrate adhesion-dependent cell spreading organelle organization actin cytoskeleton organization actin filament-based process cytoskeleton organization regulation of cell motility regulation of locomotion regulation of cell migration nucleocytoplasmic transport positive regulation of nucleocytoplasmic transport nuclear transport regulation of protein localization to nucleus positive regulation of protein transport import into nucleus regulation of protein import into nucleus protein import into nucleus positive regulation of intracellular transport regulation of intracellular transport positive regulation of protein localization to nucleus positive regulation of protein import into nucleus intracellular transport regulation of nucleocytoplasmic transport protein localization to nucleus regulation of protein transport establishment of protein localization to organelle protein transport protein localization to organelle positive regulation of protein localization regulation of intracellular protein transport positive regulation of intracellular protein transport intracellular protein transport head development forebrain development animal organ development brain development nervous system development pallium development cerebral cortex development central nervous system development telencephalon development heart process system process cardiac muscle cell action potential involved in contraction atrial cardiac muscle cell to AV node cell signaling regulation of heart contraction regulation of system process regulation of atrial cardiac muscle cell membrane repolarization cardiac muscle contraction striated muscle contraction circulatory system process membrane repolarization during atrial cardiac muscle cell action potential regulation of membrane repolarization during atrial cardiac muscle cell action potential atrial cardiac muscle cell to AV node cell communication cell communication involved in cardiac conduction blood circulation cardiac muscle cell contraction atrial cardiac muscle cell action potential actin filament-based movement muscle contraction muscle system process regulation of blood circulation atrial cardiac muscle cell membrane repolarization cardiac conduction actin-mediated cell contraction heart contraction positive regulation of cell communication regulation of integrin-mediated signaling pathway positive regulation of signal transduction regulation of signal transduction positive regulation of integrin-mediated signaling pathway regulation of signaling regulation of cell communication positive regulation of signaling reproductive process sex differentiation cell development developmental process involved in reproduction epithelial cell differentiation Sertoli cell differentiation male gonad development male sex differentiation development of primary male sexual characteristics development of primary sexual characteristics reproductive structure development epithelium development gonad development reproductive system development Sertoli cell development establishment of Sertoli cell barrier epithelial cell development mRNA transcription by RNA polymerase II RNA metabolic process nucleobase-containing compound biosynthetic process gene expression mRNA transcription mRNA metabolic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process DNA-templated transcription nucleic acid biosynthetic process transcription by RNA polymerase II actin filament organization actin crosslink formation supramolecular fiber organization catabolic process macromolecule catabolic process negative regulation of protein catabolic process negative regulation of protein metabolic process negative regulation of macromolecule metabolic process negative regulation of catabolic process protein catabolic process regulation of catabolic process regulation of protein catabolic process cell population proliferation positive regulation of cell population proliferation positive regulation of neural precursor cell proliferation regulation of cell population proliferation neural precursor cell proliferation regulation of neural precursor cell proliferation positive regulation of canonical NF-kappaB signal transduction intracellular signal transduction regulation of intracellular signal transduction intracellular signaling cassette positive regulation of intracellular signal transduction canonical NF-kappaB signal transduction regulation of canonical NF-kappaB signal transduction hemopoiesis megakaryocyte differentiation myeloid cell differentiation megakaryocyte development myeloid cell development negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death negative regulation of apoptotic process protein localization to cell surface positive regulation of locomotion regulation of neuron migration positive regulation of cell migration neurogenesis positive regulation of cell motility neuron migration generation of neurons positive regulation of neuron migration macromolecule deacylation protein deacetylation protein deacylation tubulin deacetylation formation of radial glial scaffolds hindbrain radial glia guided cell migration hindbrain development cell migration in hindbrain adenylate cyclase-inhibiting dopamine receptor signaling pathway cellular response to nitrogen compound response to dopamine cellular response to dopamine response to monoamine response to catecholamine cellular response to catecholamine stimulus G protein-coupled dopamine receptor signaling pathway response to oxygen-containing compound response to nitrogen compound cellular response to oxygen-containing compound adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway cellular response to monoamine stimulus adenylate cyclase-modulating G protein-coupled receptor signaling pathway G protein-coupled receptor signaling pathway organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component assembly cilium assembly cilium organization cell projection assembly positive regulation of organelle organization regulation of cytoskeleton organization regulation of cellular component organization positive regulation of cellular component organization regulation of actin filament-based process regulation of actin filament bundle assembly positive regulation of actin filament bundle assembly actin filament bundle organization regulation of actin filament organization positive regulation of cellular component biogenesis positive regulation of cytoskeleton organization positive regulation of supramolecular fiber organization regulation of cellular component biogenesis regulation of organelle organization regulation of actin cytoskeleton organization actin filament bundle assembly regulation of supramolecular fiber organization semaphorin-plexin signaling pathway calcium ion transmembrane import into cytosol monoatomic ion transmembrane transport calcium ion transport metal ion transport monoatomic cation transmembrane transport transmembrane transport release of sequestered calcium ion into cytosol monoatomic ion transport monoatomic cation transport calcium ion transmembrane transport microtubule cytoskeleton organization membraneless organelle assembly mitotic cell cycle mitotic sister chromatid segregation cell cycle chromosome segregation microtubule cytoskeleton organization involved in mitosis spindle organization cell cycle process mitotic nuclear division organelle fission chromosome organization sister chromatid segregation spindle assembly mitotic spindle organization mitotic spindle assembly nuclear division mitotic cell cycle process nuclear chromosome segregation microtubule-based process protein maturation blood coagulation, intrinsic pathway blood coagulation, fibrin clot formation protein activation cascade regulation of cell activation positive regulation of platelet activation positive regulation of cell activation regulation of platelet activation protein localization to bicellular tight junction protein localization to cell junction protein localization to cell-cell junction morphogenesis of an epithelium epiboly involved in wound healing morphogenesis of an epithelial sheet tissue morphogenesis epiboly wound healing, spreading of cells positive regulation of cation transmembrane transport regulation of potassium ion transport potassium ion transmembrane transport regulation of monoatomic ion transmembrane transport positive regulation of monoatomic ion transport positive regulation of transmembrane transport positive regulation of monoatomic ion transmembrane transport regulation of metal ion transport regulation of monoatomic ion transport regulation of potassium ion transmembrane transport positive regulation of potassium ion transport regulation of transmembrane transport positive regulation of potassium ion transmembrane transport regulation of monoatomic cation transmembrane transport potassium ion transport negative regulation of RNA biosynthetic process negative regulation of transcription by RNA polymerase I regulation of RNA metabolic process transcription by RNA polymerase I negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of DNA-templated transcription regulation of transcription by RNA polymerase I regulation of gene expression negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription negative regulation of RNA metabolic process	membrane-bounded organelle intracellular anatomical structure membrane intracellular vesicle intracellular membrane-bounded organelle endomembrane system specific granule membrane intracellular organelle cytoplasmic vesicle membrane cellular anatomical structure bounding membrane of organelle vesicle membrane cytoplasmic vesicle organelle membrane-bounded organelle intracellular anatomical structure membrane intracellular vesicle intracellular membrane-bounded organelle endomembrane system specific granule membrane intracellular organelle cytoplasmic vesicle membrane cellular anatomical structure bounding membrane of organelle vesicle membrane cytoplasmic vesicle organelle secretory granule secretory vesicle cytoplasm vesicle organelle membrane secretory granule membrane specific granule cell periphery cell surface plasma membrane external side of plasma membrane side of membrane extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space extracellular membrane-bounded organelle protein-containing complex receptor complex tertiary granule membrane tertiary granule anchoring junction cell junction focal adhesion cell-substrate junction plasma membrane protein complex membrane protein complex integrin alphaD-beta2 complex integrin complex plasma membrane signaling receptor complex protein complex involved in cell adhesion integrin alphaL-beta2 complex integrin alphaX-beta2 complex integrin alphaM-beta2 complex ficolin-1-rich granule membrane ficolin-1-rich granule membrane microdomain membrane raft plasma membrane raft plasma membrane region somatodendritic compartment cell body perikaryon neuronal cell body intracellular membraneless organelle Z disc sarcomere I band membraneless organelle contractile muscle fiber supramolecular fiber myofibril supramolecular polymer supramolecular complex cell-cell junction podosome cytoskeleton actin cytoskeleton cytosol synapse glutamatergic synapse cell projection dendrite dendritic tree neuron projection dendritic shaft plasma membrane bounded cell projection perinuclear region of cytoplasm polymeric cytoskeletal fiber actin filament postsynapse cell cortex cortical cytoskeleton nucleus membrane-enclosed lumen nucleolus intracellular organelle lumen organelle lumen nuclear lumen growth cone axon distal axon site of polarized growth glycoprotein Ib-IX-V complex glycoprotein complex nuclear protein-containing complex Myb complex apical dendrite

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR033760	Integrin beta N-terminal	Domain
A	IPR036349	Integrin beta tail domain superfamily	Homologous Superfamily
A	IPR014836	Integrin beta subunit, cytoplasmic domain	Domain
A	IPR012896	Integrin beta subunit, tail	Domain
A	IPR036465	von Willebrand factor A-like domain superfamily	Homologous Superfamily
A	IPR057073	Integrin beta, epidermal growth factor-like domain 2	Domain
A	IPR032695	Integrin domain superfamily	Homologous Superfamily
A	IPR015812	Integrin beta subunit	Family
A	IPR057243	Integrins beta, I-EGF domain, conserved site	Conserved Site
A	IPR002369	Integrin beta subunit, VWA domain	Domain
A	IPR016201	PSI domain	Domain
A	IPR015439	Integrin beta-2 superfamily	Homologous Superfamily
A	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A	IPR001589	Actinin-type actin-binding domain, conserved site	Conserved Site
A	IPR017868	Filamin/ABP280 repeat-like	Repeat
A	IPR036872	CH domain superfamily	Homologous Superfamily
A	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
A	IPR001298	Filamin/ABP280 repeat	Repeat
A	IPR001715	Calponin homology domain	Domain
A	IPR044801	Filamin family	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P21333	leukocyte adhesion deficiency 1 acute promyelocytic leukemia Liver Cirrhosis, Experimental calcinosis leukocyte disease nephrosis dermatitis pneumonia heart valve disease leukocyte adhesion deficiency allergic disease Behcet disease Duchenne muscular dystrophy pneumonitis glioblastoma leukocyte adhesion deficiency 1 acute promyelocytic leukemia Liver Cirrhosis, Experimental calcinosis leukocyte disease nephrosis dermatitis pneumonia heart valve disease leukocyte adhesion deficiency allergic disease Behcet disease Duchenne muscular dystrophy pneumonitis glioblastoma Sjogren syndrome tuberculosis invasive ductal breast carcinoma acute myeloid leukemia astrocytic tumor lung carcinoma malignant mesothelioma cutaneous lupus erythematosus ovarian cancer Down syndrome pilocytic astrocytoma head and neck cancer IgA glomerulonephritis large cell medulloblastoma B-cell chronic lymphocytic leukemia brain cancer malignant ependymoma breast cancer pancreatic intraductal papillary-mucinous carcinoma dry eye syndrome gastric carcinoma subependymal giant cell astrocytoma interstitial cystitis ulcerative colitis lung cancer malignant glioma breast carcinoma chronic obstructive pulmonary disease osteosarcoma dermatomyositis pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia periventricular nodular heterotopia cardiac valvular dysplasia, X-linked otopalatodigital syndrome type 2 Melnick-Needles syndrome FG syndrome terminal osseous dysplasia-pigmentary defects syndrome FG syndrome 2 frontometaphyseal dysplasia frontometaphyseal dysplasia 1 intestinal pseudoobstruction, neuronal, chronic idiopathic, X-linked otopalatodigital syndrome type 1 multiple epiphyseal dysplasia Oto-Palato-digital syndrome type 1 benign breast phyllodes tumor breast carcinoma osteochondrodysplasia heterotopia, periventricular, X-linked dominant congenital short bowel syndrome 1 epilepsy Marfan syndrome oligodendroglioma gastric carcinoma acute myeloid leukemia pancreatic ductal adenocarcinoma atypical teratoid rhabdoid tumor intellectual disability intestinal pseudo-obstruction primitive neuroectodermal tumor lung carcinoma malignant colon neoplasm spina bifida malignant glioma subependymal giant cell astrocytoma testicular germ cell tumor medulloblastoma neuronal intestinal dysplasia FG syndrome 3 otopalatodigital syndrome spectrum disorder glioblastoma arthrogryposis pancreatic intraductal papillary-mucinous neoplasm intestinal disease phyllodes tumor bowel dysfunction psoriasis spondyloepiphyseal dysplasia Ehlers-Danlos syndrome neuronal intestinal pseudoobstruction osteosarcoma ovarian cancer astrocytic tumor hydrocephalus intestinal obstruction pilocytic astrocytoma breast cancer Schwartz-Jampel syndrome malignant breast phyllodes tumor malignant ependymoma spondyloepiphyseal dysplasia tarda, X-linked diabetes mellitus malignant pancreatic neoplasm