5Y97
Crystal structure of snake gourd seed lectin in complex with lactose
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d5y97c1 | All beta proteins | beta-Trefoil | Ricin B-like lectins | automated matches | automated matches | (Trichosanthes anguina ) [TaxId: 50544 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | RIP | e5y97B1 | A: a+b two layers | X: RIP/Polo-box domain | H: Ribosome inactivating proteins (RIP) (From Topology) | T: Ribosome inactivating proteins (RIP) | F: RIP | ECOD (1.6) |
C | Ricin_B_lectin | e5y97C2 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: Ricin_B_lectin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 6.10.250.2640 | Special | Helix non-globular | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
B | 3.40.420.10 | Alpha Beta | 3-Layer(aba) Sandwich | Ricin (A subunit) | domain 1 | CATH (4.3.0) |
B | 4.10.470.10 | Few Secondary Structures | Irregular | Ricin (A Subunit), domain 2 | Ricin (A Subunit), domain 2 | CATH (4.3.0) |
C | 2.80.10.50 | Mainly Beta | Trefoil | Trefoil (Acidic Fibroblast Growth Factor, subunit A) | CATH (4.3.0) |