Structure of the Methanosarcina mazei class II CPD-photolyase in complex with intact, phosphodiester linked, CPD-lesion
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | TF_Zn_Ribbon | e5zcwA1 | A: alpha bundles | X: PriB N-terminal domain-like | H: ADP-ribosylation | T: ADP-ribosylation | F: TF_Zn_Ribbon | ECOD (develop294) |
| B | TF_Zn_Ribbon | e5zcwB1 | A: alpha bundles | X: PriB N-terminal domain-like | H: ADP-ribosylation | T: ADP-ribosylation | F: TF_Zn_Ribbon | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
| A | 1.25.40.80 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | CATH (4.3.0) | |
| A | 1.10.579.10 | Mainly Alpha | Orthogonal Bundle | DNA Cyclobutane Dipyrimidine Photolyase, subunit A | domain 3 | CATH (4.3.0) |
| B | 3.40.50.620 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | HUPs | CATH (4.3.0) |
| B | 1.25.40.80 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | CATH (4.3.0) | |
| B | 1.10.579.10 | Mainly Alpha | Orthogonal Bundle | DNA Cyclobutane Dipyrimidine Photolyase, subunit A | domain 3 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036155 | Cryptochrome/photolyase, N-terminal domain superfamily | Homologous Superfamily | |
| IPR052219 | DNA Photolyase Class-2 | Family | |
| IPR006050 | DNA photolyase, N-terminal | Domain | |
| IPR036134 | Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily | Homologous Superfamily | |
| IPR008148 | DNA photolyase class 2 | Family | |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold | Homologous Superfamily |














