Annotations: 5ZD4

Crystal structure of MBP-fused BIL1/BZR1 in complex with double-stranded DNA

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F [auth B]	MIF4G	e5zd4B1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
E [auth A]	MIF4G	e5zd4A1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
B [auth D]	MIF4G	e5zd4D1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C], B [auth D], E [auth A], F [auth B]	PF01547	Bacterial extracellular solute-binding protein (SBP_bac_1)	Bacterial extracellular solute-binding protein	-	Family
A [auth C], B [auth D], E [auth A], F [auth B]	PF05687	BES1/BZR1 plant transcription factor, N-terminal (BES1_N)	BES1/BZR1 plant transcription factor, N-terminal	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C], B [auth D], E [auth A], F [auth B]	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1	transporter activity carbohydrate transmembrane transporter activity transmembrane transporter activity oligosaccharide binding binding disaccharide binding carbohydrate binding maltose binding DNA binding nucleic acid binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding double-stranded DNA binding transporter activity carbohydrate transmembrane transporter activity transmembrane transporter activity oligosaccharide binding binding disaccharide binding carbohydrate binding maltose binding DNA binding nucleic acid binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding double-stranded DNA binding cis-regulatory region sequence-specific DNA binding transcription regulatory region nucleic acid binding transcription regulator activity DNA-binding transcription factor activity	localization transport carbohydrate transport oligosaccharide transport disaccharide transport establishment of localization maltose transport polysaccharide localization dextrin transport macromolecule localization maltodextrin transmembrane transport polysaccharide transport regulation of cellular process negative regulation of biological process localization transport carbohydrate transport oligosaccharide transport disaccharide transport establishment of localization maltose transport polysaccharide localization dextrin transport macromolecule localization maltodextrin transmembrane transport polysaccharide transport regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process developmental process multicellular organismal process reproductive system development reproductive process developmental process involved in reproduction multicellular organism development fruit development seed development anatomical structure development reproductive structure development post-embryonic development system development response to acid chemical response to stimulus response to stress response to chemical response to oxygen-containing compound response to abiotic stimulus response to water response to water deprivation cellular response to stimulus response to lipid signaling hormone-mediated signaling pathway cell communication brassinosteroid mediated signaling pathway cellular response to endogenous stimulus response to hormone response to steroid hormone signal transduction cellular response to steroid hormone stimulus cellular response to hormone stimulus steroid hormone receptor signaling pathway cell surface receptor signaling pathway response to endogenous stimulus cellular response to brassinosteroid stimulus cellular response to oxygen-containing compound cellular response to chemical stimulus response to brassinosteroid cellular response to lipid plant organ development floral whorl development flower development reproductive shoot system development plant-type ovary development plant ovule development carpel development gynoecium development shoot system development phyllome development floral organ development response to light stimulus response to radiation	ATPase dependent transmembrane transport complex ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex transporter complex ATP-binding cassette (ABC) transporter complex cell periphery cellular anatomical structure transmembrane transporter complex extracellular region outer membrane-bounded periplasmic space ATPase dependent transmembrane transport complex ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex transporter complex ATP-binding cassette (ABC) transporter complex cell periphery cellular anatomical structure transmembrane transporter complex extracellular region outer membrane-bounded periplasmic space cell envelope periplasmic space intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle
C [auth G], D [auth H], G [auth E], H [auth F]	DNA (5'-D(TPTPCPAPCPAPCPGPTPGPTPGPAPAP*A)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C], B [auth D], E [auth A], F [auth B]	IPR006060	Maltose/Cyclodextrin ABC transporter, substrate-binding protein	Family
A [auth C], B [auth D], E [auth A], F [auth B]	IPR006059	Bacterial-type extracellular solute-binding protein	Family
A [auth C], B [auth D], E [auth A], F [auth B]	IPR006061	Solute-binding family 1, conserved site	Conserved Site
A [auth C], B [auth D], E [auth A], F [auth B]	IPR033264	BZR family	Family
A [auth C], B [auth D], E [auth A], F [auth B]	IPR008540	BES1/BZR1 plant transcription factor, N-terminal	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

5ZD4 | pdb_00005zd4

Crystal structure of MBP-fused BIL1/BZR1 in complex with double-stranded DNA

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage