5CJ4
Crystal Structure of Amino Acids 1562-1622 of MYH7
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8036633 | 3001319 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8036633 | 3001319 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8036633 | 3001319 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8036633 | 3001319 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF06632 | e5cj4A2 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: PF06632 | ECOD (1.6) |
A | F_UNCLASSIFIED | e5cj4A3 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF21924 | e5cj4A1 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21924 | ECOD (1.6) |
B | PF06632 | e5cj4B1 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: PF06632 | ECOD (1.6) |
B | F_UNCLASSIFIED | e5cj4B3 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF21924 | e5cj4B2 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21924 | ECOD (1.6) |
C | PF06632 | e5cj4C2 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: PF06632 | ECOD (1.6) |
C | F_UNCLASSIFIED | e5cj4C1 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
C | PF21924 | e5cj4C3 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21924 | ECOD (1.6) |
D | PF06632 | e5cj4D3 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: PF06632 | ECOD (1.6) |
D | F_UNCLASSIFIED | e5cj4D2 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
D | PF21924 | e5cj4D1 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21924 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.210.10 | Mainly Beta | Beta Complex | Dna Repair Protein Xrcc4 | Chain: A, domain 1 | CATH (4.3.0) |
A | 1.20.5.370 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
B | 2.170.210.10 | Mainly Beta | Beta Complex | Dna Repair Protein Xrcc4 | Chain: A, domain 1 | CATH (4.3.0) |
B | 1.20.5.370 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
C | 2.170.210.10 | Mainly Beta | Beta Complex | Dna Repair Protein Xrcc4 | Chain: A, domain 1 | CATH (4.3.0) |
C | 1.20.5.370 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
D | 2.170.210.10 | Mainly Beta | Beta Complex | Dna Repair Protein Xrcc4 | Chain: A, domain 1 | CATH (4.3.0) |
D | 1.20.5.370 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF06632 | XRCC4 N-terminal domain (XRCC4) | XRCC4 N-terminal domain | This family consists of several eukaryotic DNA double-strand break repair and V(D)J recombination protein XRCC4 sequences. In the non-homologous end joining pathway of DNA double-strand break repair, the ligation step is catalysed by a complex of XRC ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR014751 | DNA repair protein XRCC4-like, C-terminal | Homologous Superfamily | |
IPR010585 | DNA repair protein XRCC4 | Family | |
IPR038051 | XRCC4-like, N-terminal domain superfamily | Homologous Superfamily | |
IPR009089 | XRCC4, N-terminal domain superfamily | Homologous Superfamily | |
IPR036961 | Kinesin motor domain superfamily | Homologous Superfamily | |
IPR000048 | IQ motif, EF-hand binding site | Binding Site | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR014751 | DNA repair protein XRCC4-like, C-terminal | Homologous Superfamily | |
IPR001609 | Myosin head, motor domain | Domain | |
IPR002928 | Myosin tail | Domain | |
IPR004009 | Myosin, N-terminal, SH3-like | Domain | |
IPR008989 | Myosin S1 fragment, N-terminal | Homologous Superfamily |