5EX3
Crystal structure of human SMYD3 in complex with a VEGFR1 peptide
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | zf-MYND,SET | e5ex3A1 | A: beta barrels | X: beta-clip | H: SET domain-like (From Topology) | T: SET domain-like | F: zf-MYND,SET | ECOD (1.6) |
A | TPR_11_7 | e5ex3A2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: TPR_11_7 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.170.270.10 | Mainly Beta | Beta Complex | Beta-clip-like | SET domain | CATH (4.3.0) |
A | 6.10.140.2220 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) | |
A | 1.10.220.160 | Mainly Alpha | Orthogonal Bundle | Annexin V | domain 1 | CATH (4.3.0) |
A | 1.25.40.970 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | CATH (4.3.0) | |
A | 1.25.40.10 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Tetratricopeptide repeat domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00856 | SET domain (SET) | SET domain | - | Family | |
PF01753 | MYND finger (zf-MYND) | MYND finger | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
B [auth D] | MLY | Parent Component: LYS :  AA0075 :  N6,N6-dimethyl-L-lysine MOD:00084 |