5FLC
Architecture of human mTOR Complex 1 - 5.9 Angstrom reconstruction
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
F [auth B] | SCOP2B Superfamily | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 8036936 | 3001600 | SCOP2B (2022-06-29) |
J [auth F] | SCOP2B Superfamily | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 8036936 | 3001600 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
F [auth B] | FRB_dom | e5flcB2 | A: alpha bundles | X: Four-helical up-and-down bundle | H: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) (From Topology) | T: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | F: FRB_dom | ECOD (1.6) |
F [auth B] | FAT | e5flcB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: FAT | ECOD (1.6) |
F [auth B] | PI3_PI4_kinase | e5flcB3 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PI3_PI4_kinase | ECOD (1.6) |
J [auth F] | FRB_dom | e5flcF3 | A: alpha bundles | X: Four-helical up-and-down bundle | H: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) (From Topology) | T: FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | F: FRB_dom | ECOD (1.6) |
J [auth F] | FAT | e5flcF2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: FAT | ECOD (1.6) |
J [auth F] | PI3_PI4_kinase | e5flcF1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PI3_PI4_kinase | ECOD (1.6) |
H [auth D] | ANAPC4_WD40_9 | e5flcD1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_9 | ECOD (1.6) |
L [auth H] | ANAPC4_WD40_9 | e5flcH1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_9 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
F [auth B], J [auth F] | PF02260 | FATC domain (FATC) | FATC domain | - | Family |
F [auth B], J [auth F] | PF08771 | FKBP12-rapamycin binding domain (FRB_dom) | FKBP12-rapamycin binding domain | The macrolide antibiotic rapamycin and the cytosol protein FKBP12 can form a complex which specifically inhibits the TORC1 complex, leading to growth arrest. The FKBP12-rapamycin complex interferes with TORC1 function by binding to the FKBP12-rapa ... | Domain |
F [auth B], J [auth F] | PF00454 | Phosphatidylinositol 3- and 4-kinase (PI3_PI4_kinase) | Phosphatidylinositol 3- and 4-kinase | - | Family |
F [auth B], J [auth F] | PF02259 | FAT domain (FAT) | FAT domain | - | Repeat |
H [auth D], L [auth H] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |