Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd6aqgb1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Mycobacterium ulcerans Agy99 ) [TaxId: 362242 ], SCOPe (2.08)
Bd6aqgb2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches (Mycobacterium ulcerans Agy99 ) [TaxId: 362242 ], SCOPe (2.08)
Dd6aqgd1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Mycobacterium ulcerans Agy99 ) [TaxId: 362242 ], SCOPe (2.08)
Dd6aqgd2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches (Mycobacterium ulcerans Agy99 ) [TaxId: 362242 ], SCOPe (2.08)
Ad6aqga1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Mycobacterium ulcerans Agy99 ) [TaxId: 362242 ], SCOPe (2.08)
Ad6aqga2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches (Mycobacterium ulcerans Agy99 ) [TaxId: 362242 ], SCOPe (2.08)
Cd6aqgc1 All beta proteins OB-fold Nucleic acid-binding proteins automated matches automated matches (Mycobacterium ulcerans Agy99 ) [TaxId: 362242 ], SCOPe (2.08)
Cd6aqgc2 Alpha and beta proteins (a+b) Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases automated matches automated matches (Mycobacterium ulcerans Agy99 ) [TaxId: 362242 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BtRNA_anti-codone6aqgB1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
BtRNA-synt_2e6aqgB2 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
DtRNA_anti-codone6aqgD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
DtRNA-synt_2e6aqgD2 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
AtRNA_anti-codone6aqgA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
AtRNA-synt_2e6aqgA2 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)
CtRNA_anti-codone6aqgC1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: tRNA_anti-codonECOD (1.6)
CtRNA-synt_2e6aqgC2 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: tRNA-synt_2ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF00152tRNA synthetases class II (D, K and N) (tRNA-synt_2)tRNA synthetases class II (D, K and N)- Domain
A, B, C, D
PF01336OB-fold nucleic acid binding domain (tRNA_anti-codon)OB-fold nucleic acid binding domainThis family contains OB-fold domains that bind to nucleic acids [4]. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See Pfam:PF00152). Aminoacyl-tRNA synthetases catalyse the addition of an a ...This family contains OB-fold domains that bind to nucleic acids [4]. The family includes the anti-codon binding domain of lysyl, aspartyl, and asparaginyl -tRNA synthetases (See Pfam:PF00152). Aminoacyl-tRNA synthetases catalyse the addition of an amino acid to the appropriate tRNA molecule EC:6.1.1.-. This family also includes part of RecG helicase involved in DNA repair. Replication factor A is a hetero-trimeric complex, that contains a subunit in this family [2,3]. This domain is also found at the C-terminus of bacterial DNA polymerase III alpha chain.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Lysine--tRNA ligase