Crystal structure of Pfs25 in complex with the transmission blocking antibody 1245
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth C] | d6b0gc2 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | C1 set domains (antibody constant domain-like) | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| A [auth C] | d6b0gc1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| B [auth D] | d6b0gd_ | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | automated matches | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth C] | e6b0gC1 | A: SH3 | X: SH3 | H: SH3 | T: HAT_PRP39_N, HAT_PRP39_C | F: | ECOD (20:10:01) | |
| B [auth D] | e6b0gD1 | A: SH3 | X: SH3 | H: SH3 | T: HAT_PRP39_N, HAT_PRP39_C | F: | ECOD (20:10:01) | |
| C [auth E] | e6b0gE1 | A: SH3 | X: SH3 | H: SH3 | T: HAT_PRP39_N, HAT_PRP39_C | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A [auth C] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| B [auth D] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| C [auth E] | 2.90.20.10 | Mainly Beta | Orthogonal Prism | Plasmodium vivax P25 fold | Plasmodium vivax P25 domain | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| A [auth C] | Fab 1245 | L-KAPPA | Homo sapiens (human) | IGKV2-30*01, IGKJ4*01, IGKJ4*02, IGKJ1S2*01, IGKC*01 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-1_KAPPA | IMGT (202609-0) |
| B [auth D] | Fab 1245 | VH-CH1 | Homo sapiens (human) | IGHV1-18*01, IGHV1-18*04, IGHJ6*01, IGHJ6*02, IGHG1*01, IGHG1*02, IGHG1*04, IGHG1*05 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_KAPPA | IMGT (202609-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| A [auth C] | Light Chain | IGKV2 | Kappa | 25 kda ookinete surface antigen | SAbDab (2026-03-13) |
| B [auth D] | Heavy Chain | IGHV1 | - | 25 kda ookinete surface antigen | SAbDab (2026-03-13) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| A [auth C] | 1245 Antibody, Light Chain | - | - | - |
| B [auth D] | 1245 Antibody, Heavy Chain | - | - | - |
| C [auth E] | 25 kDa ookinete surface antigen | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| C [auth E] | IPR010423 | Ookinete surface antigen, EGF domain | Domain |
| C [auth E] | IPR000742 | EGF-like domain | Domain |
