6BO9
Cryo-EM structure of human TRPV6 in amphipols
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Ankyrin repeat | 8089699 | 3000154 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Voltage-gated potassium channels | 8089816 | 3000023 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Voltage-gated potassium channels | 8089816 | 3000023 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Ankyrin repeat | 8089699 | 3000154 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Voltage-gated potassium channels | 8089816 | 3000023 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Ankyrin repeat | 8089699 | 3000154 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ankyrin repeat | 8089699 | 3000154 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Voltage-gated potassium channels | 8089816 | 3000023 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Ank_2 | e6bo9B2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
B | Ion_trans | e6bo9B1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans | ECOD (1.6) |
D | Ank_2 | e6bo9D1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
D | Ion_trans | e6bo9D2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans | ECOD (1.6) |
A | Ank_2 | e6bo9A2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
A | Ion_trans | e6bo9A1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans | ECOD (1.6) |
C | Ank_2 | e6bo9C2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
C | Ion_trans | e6bo9C1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002110 | Ankyrin repeat | Repeat | |
IPR005821 | Ion transport domain | Domain | |
IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily | |
IPR024862 | Transient receptor potential cation channel subfamily V | Family | |
IPR008345 | Transient receptor potential cation channel subfamily V member 6 | Family | |
IPR008344 | Transient receptor potential cation channel subfamily V member 5/6 | Family |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Channels: Transient Receptor Potential (TRP) | TRPV6 transient receptor potential calcium channel in nanodiscs |