6BOQ
Human APE1 substrate complex with an A/A mismatch adjacent the THF
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Exo_endo_phos | e6boqA1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: Exo_endo_phos | ECOD (1.6) |
B | Exo_endo_phos | e6boqB1 | A: a+b four layers | X: Carbon-nitrogen hydrolase-like | H: DNase I-like (From Topology) | T: DNase I-like | F: Exo_endo_phos | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
B | 3.60.10.10 | Alpha Beta | 4-Layer Sandwich | Deoxyribonuclease I | Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF03372 | Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) | Endonuclease/Exonuclease/phosphatase family | This large family of proteins includes magnesium dependent endonucleases and a large number of phosphatases involved in intracellular signalling [1]. This family includes: AP endonuclease proteins EC:4.2.99.18 e.g Swiss:P27695, DNase I proteins EC:3. ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036691 | Endonuclease/exonuclease/phosphatase superfamily | Homologous Superfamily | |
IPR005135 | Endonuclease/exonuclease/phosphatase | Domain | |
IPR020847 | AP endonuclease 1, binding site | Binding Site | |
IPR020848 | AP endonuclease 1, conserved site | Conserved Site | |
IPR004808 | AP endonuclease 1 | Family |