6CAA
CryoEM structure of human SLC4A4 sodium-coupled acid-base transporter NBCe1
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Sodium-coupled acid-base transporter, SLC4A-like | 8092951 | 4007786 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Nucleobase/cation symporter 2, NCS2-like | 8092952 | 3002647 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Nucleobase/cation symporter 2, NCS2-like | 8092952 | 3002647 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | HCO3_cotransp | e6caaA1 | A: alpha complex topology | X: Uracil Transporter UraA (From Topology) | H: Uracil Transporter UraA (From Topology) | T: Uracil Transporter UraA | F: HCO3_cotransp | ECOD (1.6) |
B | HCO3_cotransp | e6caaB1 | A: alpha complex topology | X: Uracil Transporter UraA (From Topology) | H: Uracil Transporter UraA (From Topology) | T: Uracil Transporter UraA | F: HCO3_cotransp | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR011531 | Bicarbonate transporter-like, transmembrane domain | Domain | |
IPR003024 | Sodium bicarbonate cotransporter | Family | |
IPR013769 | Band 3 cytoplasmic domain | Domain | |
IPR016152 | Phosphotransferase/anion transporter | Homologous Superfamily | |
IPR003020 | Bicarbonate transporter, eukaryotic | Family |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | APC (Amino acid-Polyamine-organoCation) superfamily | Anion exchanger family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Solute Carrier (SLC) Transporter Superfamily | SLC4A4 Na+-coupled acid-base transporter NBCe1 |