6CKV | pdb_00006ckv

Solution NMR structure of human BOK

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6ckva_	Membrane and cell surface proteins and peptides	Toxins' membrane translocation domains	Bcl-2 inhibitors of programmed cell death	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Abhydrolase_6	e6ckvA1	A: alpha bundles	X: Phosphorylase/hydrolase-like	H: Ribosomal protein S5 domain 2-like	T: Ribosomal protein S5 domain 2-like	F: Abhydrolase_6	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00452	Apoptosis regulator proteins, Bcl-2 family (Bcl-2)	Apoptosis regulator proteins, Bcl-2 family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Bcl-2-related ovarian killer protein	protein binding binding BH domain binding protein domain specific binding protein-containing complex binding ubiquitin protein ligase binding ubiquitin-like protein ligase binding enzyme binding signaling receptor binding protein heterodimerization activity protein dimerization activity identical protein binding protein homodimerization activity passive transmembrane transporter activity protein binding binding BH domain binding protein domain specific binding protein-containing complex binding ubiquitin protein ligase binding ubiquitin-like protein ligase binding enzyme binding signaling receptor binding protein heterodimerization activity protein dimerization activity identical protein binding protein homodimerization activity passive transmembrane transporter activity channel activity transporter activity transmembrane transporter activity	developmental process multicellular organismal process gonad development reproductive system development reproductive process sex differentiation animal organ development developmental process involved in reproduction male gonad development male sex differentiation multicellular organism development development of primary male sexual characteristics development of primary sexual characteristics anatomical structure development reproductive structure development developmental process multicellular organismal process gonad development reproductive system development reproductive process sex differentiation animal organ development developmental process involved in reproduction male gonad development male sex differentiation multicellular organism development development of primary male sexual characteristics development of primary sexual characteristics anatomical structure development reproductive structure development system development cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation signal transduction by p53 class mediator cell death intracellular signal transduction cell communication apoptotic signaling pathway intrinsic apoptotic signaling pathway by p53 class mediator signal transduction apoptotic process intrinsic apoptotic signaling pathway programmed cell death regulation of mitochondrial depolarization negative regulation of membrane depolarization negative regulation of biological process mitochondrial depolarization regulation of membrane depolarization regulation of mitochondrial membrane potential membrane depolarization regulation of biological quality negative regulation of mitochondrial depolarization regulation of membrane potential positive regulation of programmed cell death regulation of apoptotic process positive regulation of biological process regulation of programmed cell death positive regulation of apoptotic process positive regulation of cellular process regulation of localization apoptotic mitochondrial changes regulation of signal transduction localization negative regulation of apoptotic signaling pathway positive regulation of membrane permeability negative regulation of cellular component organization negative regulation of programmed cell death establishment of localization regulation of organelle organization negative regulation of apoptotic process regulation of response to stimulus regulation of membrane permeability negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway regulation of mitochondrial membrane permeability involved in apoptotic process regulation of apoptotic signaling pathway regulation of cellular component organization negative regulation of mitochondrial membrane permeability transport negative regulation of signaling mitochondrial outer membrane permeabilization involved in programmed cell death negative regulation of cell communication positive regulation of mitochondrial membrane permeability involved in apoptotic process negative regulation of cellular process positive regulation of mitochondrial membrane permeability regulation of mitochondrial membrane permeability mitochondrion organization regulation of signaling regulation of transport negative regulation of response to stimulus negative regulation of signal transduction organelle organization negative regulation of organelle organization regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway regulation of mitochondrion organization regulation of cell communication negative regulation of membrane permeability mitochondrial outer membrane permeabilization inorganic ion homeostasis intracellular calcium ion homeostasis homeostatic process calcium ion homeostasis regulation of cytosolic calcium ion concentration cellular homeostasis chemical homeostasis intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis regulation of execution phase of apoptosis positive regulation of execution phase of apoptosis execution phase of apoptosis signal transduction in absence of ligand cell surface receptor signaling pathway extrinsic apoptotic signaling pathway extrinsic apoptotic signaling pathway in absence of ligand positive regulation of cell communication positive regulation of signal transduction regulation of intrinsic apoptotic signaling pathway positive regulation of apoptotic signaling pathway positive regulation of response to stimulus regulation of intracellular signal transduction positive regulation of intracellular signal transduction positive regulation of intrinsic apoptotic signaling pathway positive regulation of signaling cellular developmental process nervous system development neurogenesis central nervous system development gliogenesis oligodendrocyte differentiation glial cell differentiation cell differentiation cell population proliferation regulation of cell population proliferation regulation of chorionic trophoblast cell proliferation chorionic trophoblast cell proliferation neuron apoptotic process negative regulation of neuron apoptotic process regulation of neuron apoptotic process response to chemical response to cisplatin regulation of cellular response to stress regulation of response to endoplasmic reticulum stress intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway positive regulation of response to endoplasmic reticulum stress cellular response to stress regulation of response to stress response to stress response to endoplasmic reticulum stress positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway necroptotic process negative regulation of necroptotic process programmed necrotic cell death regulation of necroptotic process negative regulation of programmed necrotic cell death regulation of programmed necrotic cell death DNA damage response intrinsic apoptotic signaling pathway in response to DNA damage PERK-mediated unfolded protein response endoplasmic reticulum unfolded protein response integrated stress response signaling regulation of endoplasmic reticulum unfolded protein response positive regulation of endoplasmic reticulum unfolded protein response intracellular signaling cassette ER-nucleus signaling pathway cellular response to topologically incorrect protein regulation of PERK-mediated unfolded protein response cellular response to unfolded protein response to unfolded protein positive regulation of PERK-mediated unfolded protein response response to topologically incorrect protein cellular component disassembly cellular component disassembly involved in execution phase of apoptosis catabolic process autophagy regulation of catabolic process regulation of autophagy metabolic process process utilizing autophagic mechanism regulation of metabolic process positive regulation of organelle organization positive regulation of cellular component organization positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway positive regulation of transport release of cytochrome c from mitochondria regulation of epithelial cell apoptotic process granulosa cell apoptotic process regulation of granulosa cell apoptotic process epithelial cell apoptotic process	membrane-bounded organelle intracellular anatomical structure cis-Golgi network membrane Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure bounding membrane of organelle cis-Golgi network organelle cytoplasm organelle membrane membrane-bounded organelle intracellular anatomical structure cis-Golgi network membrane Golgi apparatus membrane intracellular membrane-bounded organelle endomembrane system intracellular organelle cellular anatomical structure bounding membrane of organelle cis-Golgi network organelle cytoplasm organelle membrane mitochondrial membrane mitochondrion organelle envelope mitochondrial envelope organelle outer membrane mitochondrial outer membrane outer membrane organelle inner membrane mitochondrial inner membrane organelle subcompartment endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum endoplasmic reticulum membrane nuclear outer membrane nuclear membrane nucleus nuclear envelope endosome membrane endosome intracellular vesicle recycling endosome cytoplasmic vesicle membrane recycling endosome membrane vesicle membrane cytoplasmic vesicle vesicle early endosome early endosome membrane Golgi apparatus subcompartment trans-Golgi network membrane trans-Golgi network

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036834	Bcl-2-like superfamily	Homologous Superfamily
A	IPR002475	Bcl2-like	Family
A	IPR046371	Bcl-2, Bcl-2 homology region 1-3	Domain
A	IPR026298	Bcl-2 family	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q9UMX3	atypical teratoid rhabdoid tumor inflammatory bowel disease malignant glioma pancreatic ductal adenocarcinoma vitiligo breast carcinoma invasive ductal breast carcinoma oligodendroglioma subependymal giant cell astrocytoma ductal breast carcinoma in situ malignant ependymoma ovarian cancer ulcerative colitis

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.