6CNM
Cryo-EM structure of the human SK4/calmodulin channel complex
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Small-conductance potassium channel gating domain | 8093287 | 4001868 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Small-conductance Ca-activated potassium (SK) channel | 8093289 | 4007802 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Calmodulin binding domain (CaMBD)-like | 8093288 | 3002034 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Voltage-gated potassium channels | 8093290 | 3000023 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Voltage-gated potassium channels | 8093290 | 3000023 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Calmodulin binding domain (CaMBD)-like | 8093288 | 3002034 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Voltage-gated potassium channels | 8093290 | 3000023 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Calmodulin binding domain (CaMBD)-like | 8093288 | 3002034 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Voltage-gated potassium channels | 8093290 | 3000023 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Calmodulin binding domain (CaMBD)-like | 8093288 | 3002034 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | EF-hand | 8033438 | 3001983 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | EF-hand | 8033438 | 3001983 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | EF-hand | 8033438 | 3001983 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | EF-hand | 8033438 | 3001983 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E | EF-hand_7_8 | e6cnmE1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
F | EF-hand_7_8 | e6cnmF1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
H | EF-hand_7_8 | e6cnmH1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
G | EF-hand_7_8 | e6cnmG1 | A: alpha arrays | X: EF-hand | H: EF-hand-related | T: EF-hand | F: EF-hand_7_8 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02888 | Calmodulin binding domain (CaMBD) | Calmodulin binding domain | - | Family | |
PF03530 | Calcium-activated SK potassium channel (SK_channel) | Calcium-activated SK potassium channel | - | Family | |
PF07885 | Ion channel (Ion_trans_2) | Ion channel | - | Family | |
PF13499 | EF-hand domain pair (EF-hand_7) | EF-hand domain pair | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR015449 | Potassium channel, calcium-activated, SK | Family | |
IPR013099 | Potassium channel domain | Domain | |
IPR036122 | SK, calmodulin-binding domain superfamily | Homologous Superfamily | |
IPR004178 | Calmodulin-binding domain | Domain | |
IPR050145 | Centrin/CML-like | Family | |
IPR002048 | EF-hand domain | Domain | |
IPR018247 | EF-Hand 1, calcium-binding site | Binding Site | |
IPR011992 | EF-hand domain pair | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Calcium-activated SK potassium channel |