6D9J | pdb_00006d9j

Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like 8052828 3002143 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibosomal protein L4 8052829 3001146 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyRibosomal protein L16p/L10e 8097320 3000884 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyRL5-like 8073894 3001709 SCOP2B (2022-06-29)
M [auth N]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082477 3000210 SCOP2B (2022-06-29)
W [auth X]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8095966 3000210 SCOP2B (2022-06-29)
X [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076754 3000334 SCOP2B (2022-06-29)
Y [auth Z]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8053047 3000334 SCOP2B (2022-06-29)
BA [auth c]SCOP2B SuperfamilyL30e-like 8094953 3001739 SCOP2B (2022-06-29)
DA [auth e]SCOP2B SuperfamilyRibosomal protein L32e 8102088 3000982 SCOP2B (2022-06-29)
EA [auth f]SCOP2B SuperfamilyTranslational proteins 8093714 3000811 SCOP2B (2022-06-29)
HA [auth i]SCOP2B SuperfamilyRibosomal protein L36e 8053119 3002161 SCOP2B (2022-06-29)
KA [auth l]SCOP2B SuperfamilyRibosomal protein L39e 8095597 3001756 SCOP2B (2022-06-29)
OA [auth p]SCOP2B SuperfamilyZn-binding ribosomal proteins 8101435 3001320 SCOP2B (2022-06-29)
VA [auth K]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like 8065344 3001911 SCOP2B (2022-06-29)
YA [auth CC]SCOP2B SuperfamilyRibosomal S3Ae-like 8053216 3002166 SCOP2B (2022-06-29)
FB [auth JJ]SCOP2B Superfamily50S Ribosomal protein L14-like 8053075 3000433 SCOP2B (2022-06-29)
IB [auth MM]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like 8052708 3002138 SCOP2B (2022-06-29)
IB [auth MM]SCOP2B SuperfamilyNucleic acid-binding proteins 8052707 3000135 SCOP2B (2022-06-29)
JB [auth NN]SCOP2B SuperfamilyL30e-like 8063980 3001739 SCOP2B (2022-06-29)
KB [auth OO]SCOP2B SuperfamilyHomeodomain-like 8052970 3000001 SCOP2B (2022-06-29)
KB [auth OO]SCOP2B SuperfamilyS15/NS1 RNA-binding domain 8052971 3001284 SCOP2B (2022-06-29)
LB [auth PP]SCOP2B SuperfamilyTranslational machinery components 8097824 3000571 SCOP2B (2022-06-29)
NB [auth RR]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8082683 3000100 SCOP2B (2022-06-29)
PB [auth TT]SCOP2B SuperfamilyS13-like H2TH domain 8101439 3000053 SCOP2B (2022-06-29)
RB [auth VV]SCOP2B SuperfamilyRibosomal protein S10 8097814 3001336 SCOP2B (2022-06-29)
TB [auth XX]SCOP2B SuperfamilyRibosomal protein S8 8079081 3000709 SCOP2B (2022-06-29)
WB [auth aa]SCOP2B SuperfamilyWinged helix DNA-binding domain 8090991 3000034 SCOP2B (2022-06-29)
ZB [auth dd]SCOP2B SuperfamilyNucleic acid-binding proteins 8095265 3000135 SCOP2B (2022-06-29)
BC [auth ff]SCOP2B SuperfamilyRibosomal protein S30e-like 8053455 3002190 SCOP2B (2022-06-29)
QB [auth UU]SCOP2B SuperfamilyWinged helix DNA-binding domain 8089322 3000034 SCOP2B (2022-06-29)
HB [auth LL]SCOP2 FamilyeS10-like 8097829 4007434 SCOP2 (2022-06-29)
HB [auth LL]SCOP2 SuperfamilyWinged helix DNA-binding domain 8097830 3000034 SCOP2 (2022-06-29)
CB [auth GG]SCOP2B SuperfamilyRibosomal protein S7 8066001 3000799 SCOP2B (2022-06-29)
Z [auth a]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8097818 3001045 SCOP2B (2022-06-29)
U [auth V]SCOP2B Superfamily50S Ribosomal protein L14-like 8072048 3000433 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTranslational proteins 8078357 3000811 SCOP2B (2022-06-29)
K [auth L]SCOP2 FamilyRibosomal protein L13e 8061344 4006241 SCOP2 (2022-06-29)
K [auth L]SCOP2 SuperfamilyRibosomal protein L13e-like 8061345 3002162 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARibosomal_L2_1e6d9jA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
ARibosomal_L2_C_2e6d9jA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
CRibosomal_L4e6d9jC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
CRibos_L4_asso_Ce6d9jC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
DRibosomal_L5ee6d9jD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
ERibosomal_L6ee6d9jE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
FRibosomal_L30_1e6d9jF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
GRibosomal_L7Ae_1e6d9jG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
HRibosomal_L6_2e6d9jH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
HRibosomal_L6e6d9jH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
IRibosomal_L16e6d9jI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
JRibosomal_L5_Ce6d9jJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
L [auth M]Ribosomal_L14ee6d9jM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
M [auth N]Ribosomal_L15ee6d9jN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
N [auth O]Ribosomal_L13e6d9jO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
P [auth Q]Ribosomal_L18e6d9jQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
Q [auth R]Ribosomal_L19e_Ne6d9jR1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
Q [auth R]Ribosomal_L19e_Ce6d9jR2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
R [auth S]Ribosomal_L18Ae6d9jS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
S [auth T]Ribosomal_L21ee6d9jT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
T [auth U]Ribosomal_L22ee6d9jU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
W [auth X]Ribosomal_L23_3e6d9jX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
X [auth Y]Ribosomal_L26e6d9jY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
Y [auth Z]Ribosomal_L27ee6d9jZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
AA [auth b]Ribosomal_L29ee6d9jb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
BA [auth c]Ribosomal_L7Aee6d9jc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
CA [auth d]Ribosomal_L31ee6d9jd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
DA [auth e]Ribosomal_L32ee6d9je1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
EA [auth f]Ribosomal_L35Aee6d9jf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
FA [auth g]Ribosomal_L34ee6d9jg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
GA [auth h]Ribosomal_L29_2e6d9jh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
HA [auth i]Ribosomal_L36ee6d9ji1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
KA [auth l]Ribosomal_L39e6d9jl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
LA [auth m]Ribosomal_L40ee6d9jm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
MA [auth n]Ribosomal_L41e6d9jn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
NA [auth o]Ribosomal_L44e6d9jo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
OA [auth p]Ribosomal_L37aee6d9jp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
PA [auth r]Ribosomal_L28ee6d9jr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
QA [auth s]Ribosomal_L10e6d9js1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
QA [auth s]Ribosomal_P0_L10ee6d9js2 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: Ribosomal_P0_L10eECOD (1.6)
RA [auth t]Ribosomal_L11e6d9jt1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
RA [auth t]Ribosomal_L11_Ne6d9jt2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)
VA [auth K]Ribosomal_L1_2nd_1e6d9jK1 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
VA [auth K]Ribosomal_L1_1st_1e6d9jK2 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1st_1ECOD (1.6)
XA [auth BB]Ribosomal_S2_2e6d9jBB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
YA [auth CC]Ribosomal_S3Ae_Ne6d9jCC1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
YA [auth CC]Ribosomal_S3Ae_Ce6d9jCC2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
AB [auth EE]Ribosomal_S3_Ce6d9jEE1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
AB [auth EE]KH_2_3e6d9jEE2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
BB [auth FF]Ribosomal_S4ee6d9jFF3 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
BB [auth FF]40S_S4_Ce6d9jFF1 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
BB [auth FF]RS4NTe6d9jFF2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
DB [auth HH]Ribosomal_S6ee6d9jHH1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
EB [auth II]Ribosomal_S7e_Ne6d9jII1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
EB [auth II]Ribosomal_S7e_C_1e6d9jII2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
FB [auth JJ]Ribosomal_S8ee6d9jJJ1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
GB [auth KK]S4e6d9jKK1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
IB [auth MM]Ribosomal_S17_1e6d9jMM1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
JB [auth NN]Ribosomal_L7Aee6d9jNN1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
KB [auth OO]Ribosomal_S13_Ne6d9jOO2 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
KB [auth OO]Ribosomal_S15_2e6d9jOO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
LB [auth PP]Ribosomal_S11e6d9jPP1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
MB [auth QQ]Ribosomal_S19e6d9jQQ1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
NB [auth RR]Ribosomal_S9e6d9jRR1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
PB [auth TT]Ribosomal_S13e6d9jTT1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
RB [auth VV]Ribosomal_S10_1e6d9jVV1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
SB [auth WW]Ribosomal_S21ee6d9jWW1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
TB [auth XX]Ribosomal_S8_N_1e6d9jXX2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
TB [auth XX]Ribosomal_S8_C_1e6d9jXX1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
UB [auth YY]Ribosom_S12_S23e6d9jYY1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
VB [auth ZZ]Ribosomal_S24ee6d9jZZ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
WB [auth aa]Ribosomal_S25e6d9jaa1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
XB [auth bb]Ribosomal_S26ee6d9jbb1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
YB [auth cc]Ribosomal_S27ee6d9jcc1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
ZB [auth dd]Ribosomal_S28ee6d9jdd1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
AC [auth ee]Ribosomal_S14_2e6d9jee1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
BC [auth ff]Ribosomal_S30e6d9jff1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
CC [auth gg]Ribosomal_S27e6d9jgg1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
DC [auth hh]DUF1899e6d9jhh1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: DUF1899ECOD (1.6)
FC [auth 9]GTP_EFTU_D2e6d9j93 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2ECOD (1.6)
FC [auth 9]EFG_IVe6d9j92 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: EFG_IVECOD (1.6)
FC [auth 9]EFG_Ce6d9j95 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_CECOD (1.6)
FC [auth 9]EFG_IIe6d9j94 A: a+b two layersX: Alpha-beta plaitsH: EF-G C-terminal domain-like (From Topology)T: EF-G C-terminal domain-likeF: EFG_IIECOD (1.6)
FC [auth 9]MnmE_helical_2nde6d9j91 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
QB [auth UU]Ribosomal_S19ee6d9jUU1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
OB [auth SS]Ribosomal_S17ee6d9jSS1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
HB [auth LL]S10_plectine6d9jLL1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
CB [auth GG]Ribosomal_S7_1e6d9jGG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
ZA [auth DD]Ribosomal_S5_C_1e6d9jDD3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
ZA [auth DD]Ribosomal_S5_3e6d9jDD1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
ZA [auth DD]Ribosomal_S5_2e6d9jDD2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
JA [auth k]Ribosomal_L38ee6d9jk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
IA [auth j]Ribosomal_L37ee6d9jj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
Z [auth a]Ribosomal_L18e6d9ja1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
V [auth W]Ribosomal_L24ee6d9jW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
U [auth V]Ribosomal_L14e6d9jV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
BRibosomal_L3e6d9jB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
O [auth P]Ribosomal_L22e6d9jP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
K [auth L]Ribosomal_L13ee6d9jL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
L [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
M [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
N [auth O]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
Q [auth R]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
R [auth S]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1]. Domain
R [auth S]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
S [auth T]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
S [auth T]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
W [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
X [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
X [auth Y]PF00467KOW motif (KOW)KOW motif- Family
Y [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
Y [auth Z]PF00467KOW motif (KOW)KOW motif- Family
VA [auth K]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10. Domain
YA [auth CC]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
AB [auth EE]PF07650KH domain (KH_2)KH domainDomain
AB [auth EE]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
DB [auth HH]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
DB [auth HH]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
FB [auth JJ]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
GB [auth KK]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
GB [auth KK]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
IB [auth MM]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
IB [auth MM]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
JB [auth NN]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
KB [auth OO]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1]. Domain
KB [auth OO]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
LB [auth PP]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
MB [auth QQ]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
NB [auth RR]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
PB [auth TT]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
RB [auth VV]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
TB [auth XX]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
UB [auth YY]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
VB [auth ZZ]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
FC [auth 9]PF00679Elongation factor G C-terminus (EFG_C)Elongation factor G C-terminusThis domain includes the carboxyl terminal regions of Elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopt a ferredoxin-like fold. Domain
FC [auth 9]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. Domain
FC [auth 9]PF14492Elongation Factor G, domain III (EFG_III)Elongation Factor G, domain IIIThis domain is found in Elongation Factor G. It shares a similar structure with domain V (Pfam:PF00679). Structural studies in drosophila indicate this is domain 3 [1]. Domain
FC [auth 9]PF03144Elongation factor Tu domain 2 (GTP_EFTU_D2)Elongation factor Tu domain 2Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.
Domain
FC [auth 9]PF03764Elongation factor G, domain IV (EFG_IV)Elongation factor G, domain IVThis domain is found in elongation factor G, elongation factor 2 and some tetracycline resistance proteins and adopts a ribosomal protein S5 domain 2-like fold. Domain
QB [auth UU]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
HB [auth LL]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. Domain
CB [auth GG]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
CB [auth GG]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
V [auth W]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
U [auth V]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
O [auth P]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
K [auth L]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Ribosomal protein L8
Ribosomal protein L4
Large ribosomal subunit protein uL18
60S ribosomal protein L6
uL30
eL8 -
60S ribosomal protein L9
60S ribosomal protein L10
Ribosomal protein L11
L [auth M]Large ribosomal subunit protein eL14
M [auth N]Ribosomal protein L15
N [auth O]uL13---
P [auth Q]eL18---
Q [auth R]eL19---
R [auth S]eL20---
S [auth T]eL21
T [auth U]eL22---
W [auth X]eL23
X [auth Y]uL24
Y [auth Z]60S ribosomal protein L27
AA [auth b]eL29
BA [auth c]eL30
CA [auth d]eL31
DA [auth e]Ribosomal protein L32
EA [auth f]eL33
FA [auth g]Large ribosomal subunit protein eL34
GA [auth h]eL35
HA [auth i]60S ribosomal protein L36
KA [auth l]eL39
LA [auth m]eL40---
MA [auth n]eL41---
NA [auth o]Large ribosomal subunit protein eL42
OA [auth p]eL43
PA [auth r]eL28
QA [auth s]60S acidic ribosomal protein P0
RA [auth t]Ribosomal protein L12
SA [auth 5]28S rRNA---
TA [auth 7]5S rRNA---
UA [auth 8]5.8S rRNA---
VA [auth K]Ribosomal protein
XA [auth BB]uS2---
YA [auth CC]40S ribosomal protein S3a
AB [auth EE]Ribosomal protein S3
BB [auth FF]eS4---
DB [auth HH]40S ribosomal protein S6
EB [auth II]40S ribosomal protein S7
FB [auth JJ]40S ribosomal protein S8
GB [auth KK]Ribosomal protein S9 (Predicted)
IB [auth MM]Ribosomal protein S11
JB [auth NN]40S ribosomal protein S12
KB [auth OO]Ribosomal protein S13
LB [auth PP]Small ribosomal subunit protein uS11
MB [auth QQ]uS19
NB [auth RR]Ribosomal protein S16
PB [auth TT]uS13
RB [auth VV]uS10
SB [auth WW]eS21---
TB [auth XX]Ribosomal protein S15a
UB [auth YY]Ribosomal protein S23
VB [auth ZZ]40S ribosomal protein S24
WB [auth aa]eS25
XB [auth bb]eS26---
YB [auth cc]40S ribosomal protein S27
ZB [auth dd]Ribosomal protein S28
AC [auth ee]eS29---
BC [auth ff]40S ribosomal protein S30
CC [auth gg]Ribosomal protein S27a
DC [auth hh]RACK1
FC [auth 9]Elongation factor 2
GC [auth 4]CrPV IRES---
EC [auth 3]P-site tRNA---
QB [auth UU]eS19
OB [auth SS]eS17
HB [auth LL]S10_plectin domain-containing protein -
CB [auth GG]Ribosomal protein S5
ZA [auth DD]uS5---
WA [auth 2]18S rRNA---
JA [auth k]eL38---
IA [auth j]Ribosomal protein L37
Z [auth a]uL15
V [auth W]eL24
U [auth V]Ribosomal protein L23
uL3
O [auth P]Large ribosomal subunit protein uL22
K [auth L]60S ribosomal protein L13- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family
IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
IPR002136Large ribosomal subunit protein uL4Family
IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR000915Large ribosomal subunit protein eL6Family
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
IPR005998Large ribosomal subunit protein uL30, eukaryotaFamily
IPR039699Large ribosomal subunit protein uL30Family
IPR035808Large ribosomal subunit protein uL30, eukaryota/archaeaDomain
IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotaDomain
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
IPR018492Ribosomal protein eL8/Nhp2 familyFamily
IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
IPR000702Large ribosomal subunit protein uL6-likeFamily
IPR001197Large ribosomal subunit protein uL16, eukaryota/archaeaFamily
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryota/archaeaConserved Site
IPR016180Large ribosomal subunit protein uL16 domainDomain
IPR047873Large ribosomal subunit protein uL16Family
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
IPR002132Large ribosomal subunit protein uL5Family
L [auth M]IPR039660Large ribosomal subunit protein eL14Family
L [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
L [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
L [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
M [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
M [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
M [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
M [auth N]IPR000439Large ribosomal subunit protein eL15Family
S [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
S [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
S [auth T]IPR001147Large ribosomal subunit protein eL21Family
S [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
W [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
W [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
W [auth X]IPR019985Large ribosomal subunit protein uL23Family
W [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
W [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
X [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
X [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
X [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
X [auth Y]IPR005824KOWDomain
X [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
X [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
Y [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
Y [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
Y [auth Z]IPR005824KOWDomain
Y [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Y [auth Z]IPR001141Large ribosomal subunit protein eL27Family
Y [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
AA [auth b]IPR002673Large ribosomal subunit protein eL29Family
BA [auth c]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
BA [auth c]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
BA [auth c]IPR000231Large ribosomal subunit protein eL30Family
BA [auth c]IPR039109Large ribosomal subunit protein eL30-likeFamily
BA [auth c]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
CA [auth d]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
CA [auth d]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
CA [auth d]IPR000054Large ribosomal subunit protein eL31Family
DA [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
DA [auth e]IPR001515Large ribosomal subunit protein eL32Family
DA [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
EA [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
EA [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
EA [auth f]IPR001780Large ribosomal subunit protein eL33Family
EA [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
FA [auth g]IPR008195Large ribosomal subunit protein eL34Family
FA [auth g]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
FA [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
GA [auth h]IPR001854Large ribosomal subunit protein uL29Family
GA [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
GA [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
GA [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
HA [auth i]IPR000509Large ribosomal subunit protein eL36Family
HA [auth i]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
KA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
KA [auth l]IPR000077Large ribosomal subunit protein eL39Family
KA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
NA [auth o]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
NA [auth o]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
NA [auth o]IPR000552Large ribosomal subunit protein eL42Family
OA [auth p]IPR002674Large ribosomal subunit protein eL43Family
OA [auth p]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
OA [auth p]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
PA [auth r]IPR029004Ribosomal eL28/Mak16Domain
PA [auth r]IPR002672Large ribosomal subunit protein eL28Family
QA [auth s]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
QA [auth s]IPR001790Large ribosomal subunit protein uL10Family
QA [auth s]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
QA [auth s]IPR050323Universal ribosomal protein uL10Family
QA [auth s]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
QA [auth s]IPR030670Large ribosomal subunit protein uL10, eukaryotaFamily
RA [auth t]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
RA [auth t]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
RA [auth t]IPR000911Ribosomal protein uL11Family
RA [auth t]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
RA [auth t]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
RA [auth t]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
VA [auth K]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
VA [auth K]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
VA [auth K]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
VA [auth K]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
VA [auth K]IPR002143Large ribosomal subunit protein uL1Family
VA [auth K]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
YA [auth CC]IPR001593Small ribosomal subunit protein eS1Family
YA [auth CC]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
YA [auth CC]IPR027500Small ribosomal subunit protein eS1, eukaryotaFamily
AB [auth EE]IPR005703Small ribosomal subunit protein uS3, eukaryota/archaealFamily
AB [auth EE]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
AB [auth EE]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
AB [auth EE]IPR004044K Homology domain, type 2Domain
AB [auth EE]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
AB [auth EE]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
AB [auth EE]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
DB [auth HH]IPR014401Small ribosomal subunit protein eS6-likeFamily
DB [auth HH]IPR001377Small ribosomal subunit protein eS6Family
DB [auth HH]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
EB [auth II]IPR000554Small ribosomal subunit protein eS7Family
EB [auth II]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
FB [auth JJ]IPR001047Small ribosomal subunit protein eS8Family
FB [auth JJ]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotaHomologous Superfamily
FB [auth JJ]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
FB [auth JJ]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
GB [auth KK]IPR002942RNA-binding S4 domainDomain
GB [auth KK]IPR022801Small ribosomal subunit protein uS4Family
GB [auth KK]IPR005710Small ribosomal subunit protein uS4, eukaryota/archaeaFamily
GB [auth KK]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
GB [auth KK]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
GB [auth KK]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
IB [auth MM]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
IB [auth MM]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IB [auth MM]IPR000266Small ribosomal subunit protein uS17Family
IB [auth MM]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
IB [auth MM]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
JB [auth NN]IPR000530Small ribosomal subunit protein eS12Family
JB [auth NN]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
JB [auth NN]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
JB [auth NN]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
KB [auth OO]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
KB [auth OO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
KB [auth OO]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotaFamily
KB [auth OO]IPR000589Small ribosomal subunit protein uS15Family
LB [auth PP]IPR001971Small ribosomal subunit protein uS11Family
LB [auth PP]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
LB [auth PP]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
MB [auth QQ]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
MB [auth QQ]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
MB [auth QQ]IPR002222Small ribosomal subunit protein uS19Family
MB [auth QQ]IPR005713Small ribosomal subunit protein uS19, eukaryota/archaeaFamily
NB [auth RR]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
NB [auth RR]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
NB [auth RR]IPR000754Small ribosomal subunit protein uS9Family
NB [auth RR]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
PB [auth TT]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
PB [auth TT]IPR001892Small ribosomal subunit protein uS13Family
PB [auth TT]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
PB [auth TT]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
RB [auth VV]IPR001848Small ribosomal subunit protein uS10Family
RB [auth VV]IPR027486Small ribosomal subunit protein uS10 domainDomain
RB [auth VV]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
RB [auth VV]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
RB [auth VV]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
TB [auth XX]IPR000630Small ribosomal subunit protein uS8Family
TB [auth XX]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
TB [auth XX]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
UB [auth YY]IPR006032Small ribosomal subunit protein uS12Family
UB [auth YY]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UB [auth YY]IPR005680Small ribosomal subunit protein uS12, eukaryota/archaeaFamily
VB [auth ZZ]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
VB [auth ZZ]IPR001976Small ribosomal subunit protein eS24Family
VB [auth ZZ]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
VB [auth ZZ]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
WB [auth aa]IPR004977Small ribosomal subunit protein eS25Family
WB [auth aa]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
YB [auth cc]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
YB [auth cc]IPR000592Small ribosomal subunit protein eS27Family
YB [auth cc]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZB [auth dd]IPR028626Ribosomal protein eS28 conserved siteConserved Site
ZB [auth dd]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
ZB [auth dd]IPR000289Small ribosomal subunit protein eS28Family
BC [auth ff]IPR039415Ubiquitin-like protein FUBIDomain
BC [auth ff]IPR019956Ubiquitin domainDomain
BC [auth ff]IPR019954Ubiquitin conserved siteConserved Site
BC [auth ff]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
BC [auth ff]IPR000626Ubiquitin-like domainDomain
BC [auth ff]IPR006846Small ribosomal subunit protein eS30Family
CC [auth gg]IPR019954Ubiquitin conserved siteConserved Site
CC [auth gg]IPR000626Ubiquitin-like domainDomain
CC [auth gg]IPR038582Small ribosomal subunit protein eS31 eukaryotic superfamilyHomologous Superfamily
CC [auth gg]IPR002906Small ribosomal subunit protein eS31Domain
CC [auth gg]IPR019956Ubiquitin domainDomain
CC [auth gg]IPR050158Ubiquitin and ubiquitin-likeFamily
CC [auth gg]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
CC [auth gg]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DC [auth hh]IPR019775WD40 repeat, conserved siteConserved Site
DC [auth hh]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
DC [auth hh]IPR045223Small ribosomal subunit protein RACK1-likeFamily
DC [auth hh]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
DC [auth hh]IPR001680WD40 repeatRepeat
DC [auth hh]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
FC [auth 9]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
FC [auth 9]IPR004161Translation elongation factor EFTu-like, domain 2Domain
FC [auth 9]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
FC [auth 9]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
FC [auth 9]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
FC [auth 9]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
FC [auth 9]IPR000795Translational (tr)-type GTP-binding domainDomain
FC [auth 9]IPR035647EF-G domain III/V-likeHomologous Superfamily
FC [auth 9]IPR041095Elongation Factor G, domain IIDomain
FC [auth 9]IPR005225Small GTP-binding domainDomain
FC [auth 9]IPR000640Elongation factor EFG, domain V-likeDomain
FC [auth 9]IPR031157Tr-type G domain, conserved siteConserved Site
QB [auth UU]IPR001266Small ribosomal subunit protein eS19Family
QB [auth UU]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
QB [auth UU]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
QB [auth UU]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
OB [auth SS]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
OB [auth SS]IPR001210Small ribosomal subunit protein eS17Family
OB [auth SS]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
HB [auth LL]IPR037447Small ribosomal subunit protein eS10Family
HB [auth LL]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
HB [auth LL]IPR005326Plectin/eS10, N-terminalDomain
CB [auth GG]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
CB [auth GG]IPR000235Small ribosomal subunit protein uS7Family
CB [auth GG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
CB [auth GG]IPR023798Small ribosomal subunit protein uS7 domainDomain
CB [auth GG]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
IA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
IA [auth j]IPR001569Large ribosomal subunit protein eL37Family
IA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
IA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth a]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
Z [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
Z [auth a]IPR030878Large ribosomal subunit protein uL15Family
Z [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
Z [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
V [auth W]IPR011017TRASH domainDomain
V [auth W]IPR056366Large ribosomal subunit protein eL24Family
V [auth W]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
V [auth W]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
V [auth W]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
U [auth V]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
U [auth V]IPR000218Large ribosomal subunit protein uL14Family
U [auth V]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
IPR000597Large ribosomal subunit protein uL3Family
IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
O [auth P]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
O [auth P]IPR005721Large ribosomal subunit protein uL22, eukaryota/archaeaFamily
O [auth P]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
O [auth P]IPR001063Large ribosomal subunit protein uL22Family
O [auth P]IPR057265Large ribosomal subunit protein uL22, archaeaFamily