6GVW | pdb_00006gvw

Crystal structure of the BRCA1-A complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
IATP-synte6gvwI1 A: alpha bundlesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: ATP-syntECOD (develop294)
DSerum_albumine6gvwD1 A: alpha bundlesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: Serum_albuminECOD (develop294)
HN6_N4_Mtasee6gvwH3 A: alpha bundlesX: P-loop domains-likeH: Helical bundle in flu nucleocapsid proteinT: Helical bundle in flu nucleocapsid proteinF: N6_N4_MtaseECOD (develop294)
HCytochrome_C554e6gvwH1 A: alpha bundlesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Cytochrome_C554ECOD (develop294)
Ce6gvwC1 A: alpha bundlesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF:ECOD (develop294)
GATP-synte6gvwG1 A: alpha bundlesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: ATP-syntECOD (develop294)
BSerum_albumine6gvwB1 A: alpha bundlesX: Ten stranded beta/alpha barrelH: Ten stranded beta/alpha barrelT: Ten stranded beta/alpha barrelF: Serum_albuminECOD (develop294)
Fe6gvwF1 A: alpha bundlesX: P-loop domains-likeH: DUF1107-likeT: DUF1107-likeF:ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G3.40.140.10 Alpha Beta 3-Layer(aba) Sandwich Cytidine Deaminase domain 2CATH (utative)
B3.40.140.10 Alpha Beta 3-Layer(aba) Sandwich Cytidine Deaminase domain 2CATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C, H
PF06113Brain and reproductive organ-expressed protein (BRE) (BRE)Brain and reproductive organ-expressed protein (BRE)- Family
B, G
PF18110BRCC36 C-terminal helical domain (BRCC36_C)BRCC36 C-terminal helical domainThis is the C-terminal domain of BRCC36, a Zn2+ dependent deubiquitinating enzyme, present in Camponotus floridanus. BRCC36 hydrolyzes lysine linked ubiquitin chains as part of macromolecular complexes that participate in either interferon signalling ...This is the C-terminal domain of BRCC36, a Zn2+ dependent deubiquitinating enzyme, present in Camponotus floridanus. BRCC36 hydrolyzes lysine linked ubiquitin chains as part of macromolecular complexes that participate in either interferon signalling or DNA-damage recognition. The domain consists of 2 non canonical helices. The domain interacts hydrophobically with helices alpha 4 and alpha 5 of KIAA0157 in the form of a coiled coil helical bundle. This interaction helps establish the association of BRCC36 with KIAA0157, a pseudo-DUB MPN- protein that is essential for the activity of BRCC36 [1].
Domain
A, F
PF21125BRCA1-A complex subunit Abraxas 1 MPN domain (MPN_2A_DUB_like)BRCA1-A complex subunit Abraxas 1 MPN domainThis entry represents the MPN domain from the Abraxas protein [1-3]. Abraxas is a component of the BRISC complex, a multiprotein complex that specifically cleaves 'Lys-63'-linked polyubiquitin, leaving the last ubiquitin chain attached to its substra ...This entry represents the MPN domain from the Abraxas protein [1-3]. Abraxas is a component of the BRISC complex, a multiprotein complex that specifically cleaves 'Lys-63'-linked polyubiquitin, leaving the last ubiquitin chain attached to its substrates.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E, J
BRCA1-A complex subunit RAP80
D, I
BRISC and BRCA1-A complex member 1
C, H
BRISC and BRCA1-A complex member 2
B, G
Lys-63-specific deubiquitinase BRCC36
A, F
BRCA1-A complex subunit Abraxas 1