6IHB
Adeno-Associated Virus 2 in complex with AAVR
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | d6ihba_ | All beta proteins | Nucleoplasmin-like/VP (viral coat and capsid proteins) | ssDNA viruses | Parvoviridae-like VP | automated matches | (Adeno-associated virus 2 Srivastava/1982 ) [TaxId: 648242 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth A] | SCOP2B Superfamily | ssDNA viruses | 8041416 | 3000931 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth R] | PKD_4 | e6ihbR1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PKD_4 | ECOD (1.6) |
B [auth A] | Parvo_coat | e6ihbA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: Parvo_coat | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth A] | 2.170.30.10 | Mainly Beta | Beta Complex | Empty Capsid Viral Protein 2 | Parvovirus coat protein VP1/VP2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth R] | PF22352 | K319L-like, PKD domain (K319L-like_PKD) | K319L-like, PKD domain | This entry represents the PKD domain of Dyslexia-associated protein KIAA0319-like protein, in which it is found in four copies. This entry also includes Kunitz-type protease inhibitor 1 and LRP11 from human. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth R] | IPR022409 | PKD/Chitinase domain | Domain |
A [auth R] | IPR000601 | PKD domain | Domain |
A [auth R] | IPR035986 | PKD domain superfamily | Homologous Superfamily |
A [auth R] | IPR013783 | Immunoglobulin-like fold | Homologous Superfamily |
A [auth R] | IPR029865 | Dyslexia-associated protein KIAA0319-like | Family |
A [auth R] | IPR013980 | MANSC domain | Domain |
B [auth A] | IPR013607 | Phospholipase A2-like domain | Domain |
B [auth A] | IPR016184 | Capsid/spike protein, ssDNA virus | Homologous Superfamily |
B [auth A] | IPR036952 | Parvovirus coat protein VP1/VP2 | Homologous Superfamily |
B [auth A] | IPR001403 | Parvovirus coat protein VP2 | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target | Associated Disease |
---|---|---|
A [auth R] | Q8IZA0 | :