Annotations: 6IJJ

Photosystem I of Chlamydomonas reinhardtii

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H [auth J]	d6ijjj_	Membrane and cell surface proteins and peptides	Single transmembrane helix	Subunit IX of photosystem I reaction centre, PsaJ	automated matches	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)
F	d6ijjf_	Membrane and cell surface proteins and peptides	Single transmembrane helix	Subunit III of photosystem I reaction centre, PsaF	automated matches	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)
E	d6ijje_	All beta proteins	SH3-like barrel	Electron transport accessory proteins	automated matches	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)
D	d6ijjd_	Alpha and beta proteins (a+b)	Photosystem I subunit PsaD	Photosystem I subunit PsaD	Photosystem I subunit PsaD	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)
C	d6ijjc_	Alpha and beta proteins (a+b)	Ferredoxin-like	4Fe-4S ferredoxins	7-Fe ferredoxin	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)
B	d6ijjb_	Membrane and cell surface proteins and peptides	Photosystem I subunits PsaA/PsaB	Photosystem I subunits PsaA/PsaB	Photosystem I subunits PsaA/PsaB	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)
R [auth 8]	d6ijj8_	Membrane and cell surface proteins and peptides	Chlorophyll a-b binding protein	Chlorophyll a-b binding protein	automated matches	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)
Q [auth 7]	d6ijj7_	Membrane and cell surface proteins and peptides	Chlorophyll a-b binding protein	Chlorophyll a-b binding protein	automated matches	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)
N [auth 4]	d6ijj4_	Membrane and cell surface proteins and peptides	Chlorophyll a-b binding protein	Chlorophyll a-b binding protein	automated matches	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)
M [auth 3]	d6ijj3_	Membrane and cell surface proteins and peptides	Chlorophyll a-b binding protein	Chlorophyll a-b binding protein	automated matches	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)
K [auth 1]	d6ijj1_	Membrane and cell surface proteins and peptides	Chlorophyll a-b binding protein	Chlorophyll a-b binding protein	automated matches	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)
J [auth L]	d6ijjl_	Membrane and cell surface proteins and peptides	Photosystem I reaction center subunit XI, PsaL	Photosystem I reaction center subunit XI, PsaL	automated matches	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)
A	d6ijja_	Membrane and cell surface proteins and peptides	Photosystem I subunits PsaA/PsaB	Photosystem I subunits PsaA/PsaB	Photosystem I subunits PsaA/PsaB	automated matches	(Chlamydomonas reinhardtii ) [TaxId: 3055 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H [auth J]	SCOP2 Family	Subunit IX of photosystem I reaction centre, PsaJ	8094722	4002101	SCOP2 (2022-06-29)
H [auth J]	SCOP2 Superfamily	Subunit IX of photosystem I reaction centre, PsaJ	8094723	3000824	SCOP2 (2022-06-29)
E	SCOP2 Family	Photosystem I accessory protein E (PsaE)	8094772	4001749	SCOP2 (2022-06-29)
E	SCOP2 Superfamily	Electron transport accessory proteins	8094773	3000325	SCOP2 (2022-06-29)
D	SCOP2 Family	Photosystem I subunit PsaD	8095070	4003498	SCOP2 (2022-06-29)
D	SCOP2 Superfamily	Photosystem I subunit PsaD	8095071	3000951	SCOP2 (2022-06-29)
B	SCOP2 Family	Photosystem I subunits PsaA/PsaB	8094498	4002118	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Photosystem I subunits PsaA/PsaB	8094499	3000850	SCOP2 (2022-06-29)
Q [auth 7]	SCOP2 Family	Chlorophyll a-b binding protein	8100067	4001763	SCOP2 (2022-06-29)
Q [auth 7]	SCOP2 Superfamily	Chlorophyll a-b binding protein	8100068	3000343	SCOP2 (2022-06-29)
P [auth 6]	SCOP2 Family	Chlorophyll a-b binding protein	8099927	4001763	SCOP2 (2022-06-29)
P [auth 6]	SCOP2 Superfamily	Chlorophyll a-b binding protein	8099928	3000343	SCOP2 (2022-06-29)
O [auth 5]	SCOP2 Family	Chlorophyll a-b binding protein	8099931	4001763	SCOP2 (2022-06-29)
O [auth 5]	SCOP2 Superfamily	Chlorophyll a-b binding protein	8099932	3000343	SCOP2 (2022-06-29)
N [auth 4]	SCOP2 Family	Chlorophyll a-b binding protein	8097183	4001763	SCOP2 (2022-06-29)
N [auth 4]	SCOP2 Superfamily	Chlorophyll a-b binding protein	8097184	3000343	SCOP2 (2022-06-29)
M [auth 3]	SCOP2 Family	Chlorophyll a-b binding protein	8095790	4001763	SCOP2 (2022-06-29)
M [auth 3]	SCOP2 Superfamily	Chlorophyll a-b binding protein	8095791	3000343	SCOP2 (2022-06-29)
L [auth a]	SCOP2 Family	Chlorophyll a-b binding protein	8099101	4001763	SCOP2 (2022-06-29)
L [auth a]	SCOP2 Superfamily	Chlorophyll a-b binding protein	8099102	3000343	SCOP2 (2022-06-29)
A	SCOP2 Family	Photosystem I subunits PsaA/PsaB	8094460	4002118	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Photosystem I subunits PsaA/PsaB	8094461	3000850	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I [auth K]	MS_channel_2nd	e6ijjK1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
H [auth J]	MS_channel_2nd	e6ijjJ1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
G [auth I]	MS_channel_2nd	e6ijjI1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
F	MS_channel_2nd	e6ijjF1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
E	MS_channel_2nd	e6ijjE1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
D	MS_channel_2nd	e6ijjD1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
C	MS_channel_2nd	e6ijjC1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
B	MS_channel_2nd	e6ijjB1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
R [auth 8]	MS_channel_2nd	e6ijj81	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
Q [auth 7]	MS_channel_2nd	e6ijj71	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
P [auth 6]	MS_channel_2nd	e6ijj61	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
O [auth 5]	MS_channel_2nd	e6ijj51	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
N [auth 4]	MS_channel_2nd	e6ijj41	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
M [auth 3]	MS_channel_2nd	e6ijj31	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
L [auth a]	MS_channel_2nd	e6ijja1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
K [auth 1]	MS_channel_2nd	e6ijj11	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
J [auth L]	MS_channel_2nd	e6ijjL1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)
A	MS_channel_2nd	e6ijjA1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: MS_channel_2nd	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H [auth J]	1.20.5.510	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Single helix bin	CATH (4.3.0)
F	1.10.8.110	Mainly Alpha	Orthogonal Bundle	Helicase, Ruva Protein	domain 3	CATH (4.3.0)
E	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.3.0)
D	3.30.1470.10	Alpha Beta	2-Layer Sandwich	Photosystem 1 Reaction Centre Subunit Ii	Chain: D	CATH (utative)
C	3.30.70.20	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
B	1.20.1130.10	Mainly Alpha	Up-down Bundle	Photosystem I p700 chlorophyll A apoprotein A1	Photosystem I PsaA/PsaB	CATH (utative)
O [auth 5]	1.10.3460.10	Mainly Alpha	Orthogonal Bundle	Chlorophyll a-b binding protein	Chlorophyll a/b binding protein domain	CATH (utative)
A	1.20.1130.10	Mainly Alpha	Up-down Bundle	Photosystem I p700 chlorophyll A apoprotein A1	Photosystem I PsaA/PsaB	CATH (utative)

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6IJJ | pdb_00006ijj

Photosystem I of Chlamydomonas reinhardtii

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage