Annotations: 6JCS

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6jcsa_	All beta proteins	Nucleoplasmin-like/VP (viral coat and capsid proteins)	ssDNA viruses	Parvoviridae-like VP	automated matches	(adeno-associated virus 5 ) [TaxId: 82300 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	ssDNA viruses	8071450	3000931	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Parvo_coat	e6jcsA1	A: beta sandwiches	X: jelly-roll	H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology)	T: Nucleoplasmin-like/VP (viral coat and capsid proteins)	F: Parvo_coat	ECOD (1.6)
B [auth R]	PKD_4	e6jcsR1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: PKD_4	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.170.30.10	Mainly Beta	Beta Complex	Empty Capsid Viral Protein 2	Parvovirus coat protein VP1/VP2	CATH (utative)
B [auth R]	2.60.40.10	Mainly Beta	Sandwich	Immunoglobulin-like	Immunoglobulins	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00740	Parvovirus coat protein VP2 (Parvo_coat)	Parvovirus coat protein VP2	-	Family
B [auth R]	PF22352	K319L-like, PKD domain (K319L-like_PKD)	K319L-like, PKD domain	This entry represents the PKD domain of Dyslexia-associated protein KIAA0319-like protein, in which it is found in four copies. This entry also includes Kunitz-type protease inhibitor 1 and LRP11 from human.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Capsid protein	structural molecule activity	-	viral capsid icosahedral viral capsid virion component T=1 icosahedral viral capsid
B [auth R]	Dyslexia-associated protein KIAA0319-like protein	-	developmental process multicellular organismal process neuron migration cellular developmental process nervous system development generation of neurons neurogenesis multicellular organism development cell differentiation anatomical structure development cellular process cell migration cell motility system development	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasmic vesicle organelle intracellular vesicle cytoplasm intracellular membrane-bounded organelle vesicle nucleus membrane-enclosed lumen intracellular membraneless organelle nucleolus membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure cytoplasmic vesicle organelle intracellular vesicle cytoplasm intracellular membrane-bounded organelle vesicle nucleus membrane-enclosed lumen intracellular membraneless organelle nucleolus intracellular organelle lumen organelle lumen membraneless organelle nuclear lumen membrane Golgi apparatus endomembrane system Golgi membrane bounding membrane of organelle organelle membrane cell periphery plasma membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR013607	Phospholipase A2-like domain	Domain
A	IPR016184	Capsid/spike protein, ssDNA virus	Homologous Superfamily
A	IPR036952	Parvovirus coat protein VP1/VP2	Homologous Superfamily
A	IPR001403	Parvovirus coat protein VP2	Domain
B [auth R]	IPR022409	PKD/Chitinase domain	Domain
B [auth R]	IPR000601	PKD domain	Domain
B [auth R]	IPR035986	PKD domain superfamily	Homologous Superfamily
B [auth R]	IPR013783	Immunoglobulin-like fold	Homologous Superfamily
B [auth R]	IPR029865	Dyslexia-associated protein KIAA0319-like	Family
B [auth R]	IPR013980	MANSC domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B [auth R]	Pharos: Q8IZA0	limited scleroderma systemic sclerosis CREST syndrome osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia diffuse scleroderma ovarian cancer systemic lupus erythematosus pancreatic intraductal papillary-mucinous carcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.