Annotations: 6L8P

Crystal structure of RidA from Antarctic bacterium Psychrobacter sp. PAMC 21119

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d6l8pc1	Alpha and beta proteins (a+b)	Bacillus chorismate mutase-like	YjgF-like	automated matches	automated matches	(Psychrobacter sp. MES7-P7E ) [TaxId: 2058322 ],	SCOPe (2.08)
C	d6l8pc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Psychrobacter sp. MES7-P7E ) [TaxId: 2058322 ],	SCOPe (2.08)
B	d6l8pb_	Alpha and beta proteins (a+b)	Bacillus chorismate mutase-like	YjgF-like	automated matches	automated matches	(Psychrobacter sp. MES7-P7E ) [TaxId: 2058322 ],	SCOPe (2.08)
A	d6l8pa1	Alpha and beta proteins (a+b)	Bacillus chorismate mutase-like	YjgF-like	automated matches	automated matches	(Psychrobacter sp. MES7-P7E ) [TaxId: 2058322 ],	SCOPe (2.08)
A	d6l8pa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Psychrobacter sp. MES7-P7E ) [TaxId: 2058322 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2 Family	YjgF/L-PSP	8095254	4001510	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	YjgF-like	8095255	3001733	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	Ribonuc_L-PSP	e6l8pC1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: Ribonuc_L-PSP	ECOD (v295.2)
B	Ribonuc_L-PSP	e6l8pB1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: Ribonuc_L-PSP	ECOD (v295.2)
A	Ribonuc_L-PSP	e6l8pA1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: Ribonuc_L-PSP	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	3.30.1330.40	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
B	3.30.1330.40	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
A	3.30.1330.40	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	RidA family protein	hydrolase activity deaminase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR019897	RidA, conserved site	Conserved Site
A, B, C	IPR006056	RidA family	Family
A, B, C	IPR035959	RutC-like superfamily	Homologous Superfamily
A, B, C	IPR006175	YjgF/YER057c/UK114 family	Family
A, B, C	IPR019897	RidA, conserved site	Conserved Site
A, B, C	IPR006056	RidA family	Family
A, B, C	IPR035959	RutC-like superfamily	Homologous Superfamily
A, B, C	IPR006175	YjgF/YER057c/UK114 family	Family

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