6LTH
Structure of human BAF Base module
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth M] | SCOP2B Superfamily | PFU(mutate) domain-like | 8055786 | 3002311 | SCOP2B (2022-06-29) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth I] | PF07529 | HSA domain (HSA) | HSA domain | - | Family |
B [auth L] | PF12031 | SWI/SNF-like complex subunit BAF250/Osa (BAF250_C) | SWI/SNF-like complex subunit BAF250/Osa | - | Repeat |
F [auth P] | PF02201 | SWIB/MDM2 domain (SWIB) | SWIB/MDM2 domain | This family includes the SWIB domain and the MDM2 domain [1]. The p53-associated protein (MDM2) is an inhibitor of the p53 tumour suppressor gene binding the transactivation domain and down regulating the ability of p53 to activate transcription. Thi ... | Domain |
C [auth M] | PF04855 | SNF5 / SMARCB1 / INI1 (SNF5) | SNF5 / SMARCB1 / INI1 | - | Family |
C [auth M] | PF21459 | SWI/SNF Subunit INI1, DNA binding domain (INI1_DNA-bd) | SWI/SNF Subunit INI1, DNA binding domain | SWI/SNF complexes use the energy of ATP hydrolysis to remodel chromatin. In mammals they play a central role in regulating gene expression during differentiation and proliferation [2]. The INI1/hSNF5/SMARCB1 subunit contains and N-terminal winged hel ... | Domain |
D [auth N], E [auth O] | PF00249 | Myb-like DNA-binding domain (Myb_DNA-binding) | Myb-like DNA-binding domain | This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1]. | Domain |
D [auth N], E [auth O] | PF16495 | SWIRM-associated region 1 (SWIRM-assoc_1) | SWIRM-associated region 1 | - | Family |
D [auth N], E [auth O] | PF04433 | SWIRM domain (SWIRM) | SWIRM domain | This SWIRM domain is a small alpha-helical domain of about 85 amino acid residues found in chromosomal proteins. It contains a helix-turn helix motif and binds to DNA [1]. | Domain |
D [auth N], E [auth O] | PF16498 | SWIRM-associated domain at the C-terminal (SWIRM-assoc_3) | SWIRM-associated domain at the C-terminal | - | Family |
H [auth R] | PF14051 | DPF1-3, N-terminal (DPF1-3_N) | DPF1-3, N-terminal | - | Family |