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Data API
6M1V
Crystal structure of post fusion core of 2019-nCoV S2 subunit
External Resource: Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Gene Ontology: Gene Product Annotation
Gene Ontology Database Homepage
Chains
Polymer
Molecular Function
Biological Process
Cellular Component
A
Spike protein S2,Spike protein S2
protein binding
binding
molecular function activator activity
signaling receptor binding
molecular function regulator activity
signaling receptor regulator activity
receptor ligand activity
signaling receptor activator activity
host cell surface binding
host cell surface receptor binding
structural constituent of virion
structural molecule activity
identical protein binding
viral process
fusion of virus membrane with host endosome membrane
membrane fusion involved in viral entry into host cell
membrane organization
cellular component organization
membrane fusion
cellular process
cellular component organization or biogenesis
import into cell
receptor-mediated endocytosis of virus by host cell
biological process involved in interspecies interaction between organisms
transport
viral life cycle
establishment of localization
viral process
fusion of virus membrane with host endosome membrane
membrane fusion involved in viral entry into host cell
membrane organization
cellular component organization
membrane fusion
cellular process
cellular component organization or biogenesis
import into cell
receptor-mediated endocytosis of virus by host cell
biological process involved in interspecies interaction between organisms
transport
viral life cycle
establishment of localization
biological process involved in interaction with host
vesicle-mediated transport
biological process involved in symbiotic interaction
localization
symbiont entry into host cell
symbiont entry into host
endocytosis involved in viral entry into host cell
endocytosis
receptor-mediated endocytosis
transport of virus
symbiont-mediated perturbation of host defense response
suppression by virus of host tetherin activity
response to host defenses
response to stimulus
response to other organism
response to defenses of other organism
modulation by virus of host process
response to external stimulus
virus-mediated perturbation of host defense response
response to biotic stimulus
symbiont-mediated perturbation of host process
response to host
response to external biotic stimulus
modulation of process of another organism
modulation by virus of host cellular process
virion attachment to host cell
receptor-mediated virion attachment to host cell
adhesion of symbiont to host cell
adhesion of symbiont to host
viral gene expression
viral translation
fusion of virus membrane with host plasma membrane
regulation of biological process
positive regulation of viral life cycle
positive regulation of viral process
biological regulation
positive regulation of biological process
modulation by symbiont of entry into host
regulation of viral entry into host cell
regulation of viral life cycle
regulation of viral process
positive regulation of viral entry into host cell
positive regulation by symbiont of entry into host
regulation of biological process involved in symbiotic interaction
symbiont-mediated perturbation of host immune response
symbiont-mediated perturbation of host defenses
symbiont-mediated suppression of host immune response
symbiont-mediated suppression of host innate immune response
response to host immune response
symbiont-mediated suppression of host defenses
symbiont-mediated perturbation of host innate immune response
entry receptor-mediated virion attachment to host cell
Less
membrane
cellular anatomical entity
host extracellular space
host cellular component
cell periphery
plasma membrane
host intracellular membrane-bounded organelle
host intracellular part
host cell membrane
host cell cytoplasm part
host intracellular organelle
host cell endoplasmic reticulum-Golgi intermediate compartment membrane
host cell endoplasmic reticulum-Golgi intermediate compartment
host cell cytoplasm
membrane
cellular anatomical entity
host extracellular space
host cellular component
cell periphery
plasma membrane
host intracellular membrane-bounded organelle
host intracellular part
host cell membrane
host cell cytoplasm part
host intracellular organelle
host cell endoplasmic reticulum-Golgi intermediate compartment membrane
host cell endoplasmic reticulum-Golgi intermediate compartment
host cell cytoplasm
host cell part
host intracellular region
host cell plasma membrane
virion component
virion membrane
viral membrane
viral envelope
host cell surface
Less
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
IPR044873
Spike glycoprotein S2, coronavirus, heptad repeat 1
Domain
A
IPR044366
Spike (S) protein S1 subunit, receptor-binding domain, SARS-CoV-2
Domain
A
IPR018548
Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirus
Domain
A
IPR044341
Spike (S) protein S1 subunit, N-terminal domain, SARS-CoV-like
Domain
A
IPR032500
Spike glycoprotein S1, N-terminal domain, betacoronavirus-like
Domain
A
IPR042578
Spike glycoprotein, betacoronavirus
Family
A
IPR036326
Spike S1 subunit, receptor binding domain superfamily, betacoronavirus
Homologous Superfamily
A
IPR043002
Spike glycoprotein, N-terminal domain superfamily
Homologous Superfamily
A
IPR044874
Spike glycoprotein S2, coronavirus, heptad repeat 2
Domain
A
IPR043473
Spike glycoprotein S2 superfamily, coronavirus
Homologous Superfamily
A
IPR043607
Coronavirus spike glycoprotein S1, C-terminal
Domain
A
IPR002552
Spike glycoprotein S2, coronavirus
Domain
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