Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth B]Peptidase_M1_2e6mzcB3 A: beta sandwichesX: Baculovirus p35 protein-related (From Topology)H: Baculovirus p35 protein-related (From Topology)T: Baculovirus p35 protein-relatedF: Peptidase_M1_2ECOD (1.6)
A [auth B]CLASP_N_2e6mzcB2 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: CLASP_N_2ECOD (1.6)
A [auth B]Peptidase_M1e6mzcB1 A: mixed a+b and a/bX: Zincin-likeH: Metalloproteases (zincins) catalytic domain (From Topology)T: Metalloproteases (zincins) catalytic domainF: Peptidase_M1ECOD (1.6)
E [auth I]TAFe6mzcI2 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: TAFECOD (1.6)
E [auth I]TAF6_Ce6mzcI1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: TAF6_CECOD (1.6)
H [auth O]TFIID_30kDae6mzcO1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: TFIID_30kDaECOD (1.6)
I [auth R]TFIID_20kDae6mzcR1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: TFIID_20kDaECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth G]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
E [auth I]PF07571TAF6 C-terminal HEAT repeat domain (TAF6_C)TAF6 C-terminal HEAT repeat domain- Repeat
E [auth I]PF02969TATA box binding protein associated factor (TAF) (TAF)TATA box binding protein associated factor (TAF)TAF proteins adopt a histone-like fold.Domain
F [auth K]PF07524Bromodomain associated (Bromo_TP)Bromodomain associatedThis domain is predicted to bind DNA [1] and is often found associated with Pfam:PF00439 and in transcription factors. It has a histone-like fold.Domain
F [auth K]PF10406Transcription factor TFIID complex subunit 8 C-term (TAF8_C)Transcription factor TFIID complex subunit 8 C-termThis is the C-terminal, Delta, part of the TAF8 protein [1]. The N-terminal is generally the histone fold domain, Bromo_TP (Pfam:PF07524). TAF8 is one of the key subunits of the transcription factor for pol II, TFIID. TAF8 is one of the several gener ...This is the C-terminal, Delta, part of the TAF8 protein [1]. The N-terminal is generally the histone fold domain, Bromo_TP (Pfam:PF07524). TAF8 is one of the key subunits of the transcription factor for pol II, TFIID. TAF8 is one of the several general cofactors which are typically involved in gene activation to bring about the communication between gene-specific transcription factors and components of the general transcription machinery [2].
Domain
H [auth O]PF03540Transcription initiation factor TFIID 23-30kDa subunit (TAF10)Transcription initiation factor TFIID 23-30kDa subunit- Family
I [auth R]PF03847Transcription initiation factor TFIID subunit A (TFIID_20kDa)Transcription initiation factor TFIID subunit A- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B]Transcription initiation factor TFIID subunit 2
B [auth E]Transcription initiation factor TFIID subunit 4
C [auth G]Transcription initiation factor TFIID subunit 5
D [auth H]Transcription initiation factor TFIID subunit 6
E [auth I]Transcription initiation factor TFIID subunit 6
F [auth K]Transcription initiation factor TFIID subunit 8
G [auth M]Transcription initiation factor TFIID subunit 9
H [auth O]Transcription initiation factor TFIID subunit 10
I [auth R]Transcription initiation factor TFIID subunit 12
J [auth Z]poly(UNK)---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B]IPR016024Armadillo-type foldHomologous Superfamily
A [auth B]IPR027268Peptidase M4/M1, CTD superfamilyHomologous Superfamily
A [auth B]IPR037813Transcription initiation factor TFIID subunit 2Family
A [auth B]IPR042097Aminopeptidase N-like , N-terminal domain superfamliyHomologous Superfamily
B [auth E]IPR003894TAFH/NHR1Domain
B [auth E]IPR007900Transcription initiation factor TFIID component TAF4, C-terminalDomain
B [auth E]IPR009072Histone-foldHomologous Superfamily
B [auth E]IPR045144Transcription initiation factor TFIID component TAF4Family
B [auth E]IPR037249TAFH/NHR1 domain superfamilyHomologous Superfamily
C [auth G]IPR007582TFIID subunit TAF5, NTD2 domainDomain
C [auth G]IPR019775WD40 repeat, conserved siteConserved Site
C [auth G]IPR037264TFIID subunit TAF5, NTD2 domain superfamilyHomologous Superfamily
C [auth G]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
C [auth G]IPR001680WD40 repeatRepeat
C [auth G]IPR020472G-protein beta WD-40 repeatRepeat
C [auth G]IPR006594LIS1 homology motifConserved Site
C [auth G]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
D [auth H]IPR011442TAF6, C-terminal HEAT repeat domainDomain
D [auth H]IPR016024Armadillo-type foldHomologous Superfamily
D [auth H]IPR009072Histone-foldHomologous Superfamily
D [auth H]IPR037796Transcription initiation factor TFIID subunit 6Family
D [auth H]IPR046344TAF6, C-terminal HEAT repeat domain superfamilyHomologous Superfamily
D [auth H]IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
E [auth I]IPR011442TAF6, C-terminal HEAT repeat domainDomain
E [auth I]IPR016024Armadillo-type foldHomologous Superfamily
E [auth I]IPR009072Histone-foldHomologous Superfamily
E [auth I]IPR037796Transcription initiation factor TFIID subunit 6Family
E [auth I]IPR046344TAF6, C-terminal HEAT repeat domain superfamilyHomologous Superfamily
E [auth I]IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
F [auth K]IPR009072Histone-foldHomologous Superfamily
F [auth K]IPR037818Transcription initiation factor TFIID subunit 8Family
F [auth K]IPR006565Bromodomain associated domainDomain
F [auth K]IPR019473Transcription factor TFIID, subunit 8, C-terminalDomain
G [auth M]IPR051431Transcription initiation factor TFIID subunit 9Family
G [auth M]IPR009072Histone-foldHomologous Superfamily
G [auth M]IPR003162Transcription initiation factor TAFII31Family
H [auth O]IPR003923Transcription initiation factor TFIID, subunit 10Family
I [auth R]IPR009072Histone-foldHomologous Superfamily
I [auth R]IPR037794Transcription initiation factor TFIID subunit 12Family
I [auth R]IPR003228Transcription initiation factor TFIID subunit 12 domainDomain

Pharos: Disease Associations Pharos Homepage Annotation