Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADUF3591_1ste6mzmA1 A: beta complex topologyX: triple barrel (From Homology)H: triple barrelT: TFIID subunits TAF1-TAF7F: DUF3591_1stECOD (1.6)
ADUF3591_2nde6mzmA2 A: alpha arraysX: HTHH: HTHT: wingedF: DUF3591_2ndECOD (1.6)
J [auth O]TFIID_30kDae6mzmO1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: TFIID_30kDaECOD (1.6)
K [auth R]TFIID_20kDae6mzmR1 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: TFIID_20kDaECOD (1.6)
L [auth T]TBPe6mzmT1 A: a+b two layersX: TBP-likeH: TATA-box binding protein-like (From Topology)T: TATA-box binding protein-likeF: TBPECOD (1.6)
O [auth W]TFIIA_Ce6mzmW1 A: beta duplicates or obligate multimersX: Transcription factor IIA (TFIIA), beta-barrel domain (From Topology)H: Transcription factor IIA (TFIIA), beta-barrel domain (From Topology)T: Transcription factor IIA (TFIIA), beta-barrel domainF: TFIIA_CECOD (1.6)
O [auth W]TFIIA_Ne6mzmW2 A: alpha duplicates or obligate multimersX: TFIIA, alpha-helical domain (From Topology)H: TFIIA, alpha-helical domain (From Topology)T: TFIIA, alpha-helical domainF: TFIIA_NECOD (1.6)
P [auth X]TFIIA_gamma_Ce6mzmX2 A: beta duplicates or obligate multimersX: Transcription factor IIA (TFIIA), beta-barrel domain (From Topology)H: Transcription factor IIA (TFIIA), beta-barrel domain (From Topology)T: Transcription factor IIA (TFIIA), beta-barrel domainF: TFIIA_gamma_CECOD (1.6)
P [auth X]TFIIA_gamma_Ne6mzmX1 A: alpha duplicates or obligate multimersX: TFIIA, alpha-helical domain (From Topology)H: TFIIA, alpha-helical domain (From Topology)T: TFIIA, alpha-helical domainF: TFIIA_gamma_NECOD (1.6)
BPeptidase_M1_2e6mzmB3 A: beta sandwichesX: Baculovirus p35 protein-related (From Topology)H: Baculovirus p35 protein-related (From Topology)T: Baculovirus p35 protein-relatedF: Peptidase_M1_2ECOD (1.6)
BCLASP_N_2e6mzmB2 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: CLASP_N_2ECOD (1.6)
BPeptidase_M1e6mzmB1 A: mixed a+b and a/bX: Zincin-likeH: Metalloproteases (zincins) catalytic domain (From Topology)T: Metalloproteases (zincins) catalytic domainF: Peptidase_M1ECOD (1.6)
F [auth I]TAFe6mzmI2 A: alpha arraysX: Histone-likeH: Histone-relatedT: HistoneF: TAFECOD (1.6)
F [auth I]TAF6_Ce6mzmI1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: TAF6_CECOD (1.6)
G [auth J]TAFII55_Ne6mzmJ1 A: beta complex topologyX: triple barrel (From Homology)H: triple barrelT: TFIID subunits TAF1-TAF7F: TAFII55_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF12157Protein of unknown function (DUF3591) (DUF3591)Protein of unknown function (DUF3591)- Family
J [auth O]PF03540Transcription initiation factor TFIID 23-30kDa subunit (TAF10)Transcription initiation factor TFIID 23-30kDa subunit- Family
K [auth R]PF03847Transcription initiation factor TFIID subunit A (TFIID_20kDa)Transcription initiation factor TFIID subunit A- Domain
L [auth T]PF00352Transcription factor TFIID (or TATA-binding protein, TBP) (TBP)Transcription factor TFIID (or TATA-binding protein, TBP)- Domain
O [auth W]PF03153Transcription factor IIA, alpha/beta subunit (TFIIA)Transcription factor IIA, alpha/beta subunit- Family
P [auth X]PF02751Transcription initiation factor IIA, gamma subunit (TFIIA_gamma_C)Transcription initiation factor IIA, gamma subunitAccurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIA (TFIIA) is a multimeric protein which facilitates the binding of TFIID to the TATA b ...Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIA (TFIIA) is a multimeric protein which facilitates the binding of TFIID to the TATA box. The C-terminal domain of the gamma subunit is a 12 stranded beta-barrel.
Domain
P [auth X]PF02268Transcription initiation factor IIA, gamma subunit, helical domain (TFIIA_gamma_N)Transcription initiation factor IIA, gamma subunit, helical domainAccurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIA (TFIIA) is a multimeric protein which facilitates the binding of TFIID to the TATA ...Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIA (TFIIA) is a multimeric protein which facilitates the binding of TFIID to the TATA box. The N-terminal domain of the gamma subunit is a 4 helix bundle.
Domain
D [auth G]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
F [auth I]PF07571TAF6 C-terminal HEAT repeat domain (TAF6_C)TAF6 C-terminal HEAT repeat domain- Repeat
F [auth I]PF02969TATA box binding protein associated factor (TAF) (TAF)TATA box binding protein associated factor (TAF)TAF proteins adopt a histone-like fold.Domain
G [auth J]PF04658TAFII55 protein conserved region (TAFII55_N)TAFII55 protein conserved region- Family
H [auth K]PF07524Bromodomain associated (Bromo_TP)Bromodomain associatedThis domain is predicted to bind DNA [1] and is often found associated with Pfam:PF00439 and in transcription factors. It has a histone-like fold.Domain
H [auth K]PF10406Transcription factor TFIID complex subunit 8 C-term (TAF8_C)Transcription factor TFIID complex subunit 8 C-termThis is the C-terminal, Delta, part of the TAF8 protein [1]. The N-terminal is generally the histone fold domain, Bromo_TP (Pfam:PF07524). TAF8 is one of the key subunits of the transcription factor for pol II, TFIID. TAF8 is one of the several gener ...This is the C-terminal, Delta, part of the TAF8 protein [1]. The N-terminal is generally the histone fold domain, Bromo_TP (Pfam:PF07524). TAF8 is one of the key subunits of the transcription factor for pol II, TFIID. TAF8 is one of the several general cofactors which are typically involved in gene activation to bring about the communication between gene-specific transcription factors and components of the general transcription machinery [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Transcription initiation factor TFIID subunit 1, TAF1
J [auth O]Transcription initiation factor TFIID subunit 10
K [auth R]Transcription initiation factor TFIID subunit 12
L [auth T]TATA-box-binding protein
M [auth U]SCP DNA (80-MER)---
N [auth V]SCP DNA (80-MER)---
O [auth W]Transcription initiation factor IIA subunit 1
P [auth X]Transcription initiation factor IIA subunit 2
Q [auth Z]Unk---
Transcription initiation factor TFIID subunit 2, TAF2
C [auth D]Transcription initiation factor TFIID subunit 4, TAF4
D [auth G]Transcription initiation factor TFIID subunit 5,TAF5
E [auth H]Transcription initiation factor TFIID subunit 6
F [auth I]Transcription initiation factor TFIID subunit 6
G [auth J]Transcription initiation factor TFIID subunit 7
H [auth K]Transcription initiation factor TFIID subunit 8, TAF8
I [auth L]Transcription initiation factor TFIID subunit 9, TAF9

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR018359Bromodomain, conserved siteConserved Site
IPR009067TAFII-230 TBP-bindingDomain
IPR022591Transcription initiation factor TFIID subunit 1, histone acetyltransferase domainDomain
IPR036427Bromodomain-like superfamilyHomologous Superfamily
IPR040240Transcription initiation factor TFIID subunit 1Family
IPR001487BromodomainDomain
IPR041670Zinc knuckleDomain
IPR011177Transcription initiation factor TFIID subunit 1, animalFamily
IPR036741TAFII-230 TBP-binding domain superfamilyHomologous Superfamily
J [auth O]IPR003923Transcription initiation factor TFIID, subunit 10Family
K [auth R]IPR009072Histone-foldHomologous Superfamily
K [auth R]IPR037794Transcription initiation factor TFIID subunit 12Family
K [auth R]IPR003228Transcription initiation factor TFIID subunit 12 domainDomain
L [auth T]IPR030491TATA-box binding protein, conserved siteConserved Site
L [auth T]IPR000814TATA-box binding proteinFamily
L [auth T]IPR012295TBP domain superfamilyHomologous Superfamily
L [auth T]IPR033710TATA-box binding protein, eukaryoticFamily
O [auth W]IPR004855Transcription factor IIA, alpha/beta subunitFamily
O [auth W]IPR009088Transcription factor IIA, beta-barrelHomologous Superfamily
P [auth X]IPR015871Transcription initiation factor IIA, gamma subunit, C-terminalDomain
P [auth X]IPR015872Transcription initiation factor IIA, gamma subunit, N-terminalDomain
P [auth X]IPR009083Transcription factor IIA, alpha-helical domainHomologous Superfamily
P [auth X]IPR009088Transcription factor IIA, beta-barrelHomologous Superfamily
P [auth X]IPR003194Transcription initiation factor IIA, gamma subunitFamily
IPR016024Armadillo-type foldHomologous Superfamily
IPR027268Peptidase M4/M1, CTD superfamilyHomologous Superfamily
IPR037813Transcription initiation factor TFIID subunit 2Family
IPR042097Aminopeptidase N-like , N-terminal domain superfamliyHomologous Superfamily
C [auth D]IPR003894TAFH/NHR1Domain
C [auth D]IPR007900Transcription initiation factor TFIID component TAF4, C-terminalDomain
C [auth D]IPR009072Histone-foldHomologous Superfamily
C [auth D]IPR045144Transcription initiation factor TFIID component TAF4Family
C [auth D]IPR037249TAFH/NHR1 domain superfamilyHomologous Superfamily
D [auth G]IPR007582TFIID subunit TAF5, NTD2 domainDomain
D [auth G]IPR019775WD40 repeat, conserved siteConserved Site
D [auth G]IPR037264TFIID subunit TAF5, NTD2 domain superfamilyHomologous Superfamily
D [auth G]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
D [auth G]IPR001680WD40 repeatRepeat
D [auth G]IPR020472G-protein beta WD-40 repeatRepeat
D [auth G]IPR006594LIS1 homology motifConserved Site
D [auth G]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
E [auth H]IPR011442TAF6, C-terminal HEAT repeat domainDomain
E [auth H]IPR016024Armadillo-type foldHomologous Superfamily
E [auth H]IPR009072Histone-foldHomologous Superfamily
E [auth H]IPR037796Transcription initiation factor TFIID subunit 6Family
E [auth H]IPR046344TAF6, C-terminal HEAT repeat domain superfamilyHomologous Superfamily
E [auth H]IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
F [auth I]IPR011442TAF6, C-terminal HEAT repeat domainDomain
F [auth I]IPR016024Armadillo-type foldHomologous Superfamily
F [auth I]IPR009072Histone-foldHomologous Superfamily
F [auth I]IPR037796Transcription initiation factor TFIID subunit 6Family
F [auth I]IPR046344TAF6, C-terminal HEAT repeat domain superfamilyHomologous Superfamily
F [auth I]IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
G [auth J]IPR006751TAFII55 protein, conserved regionDomain
G [auth J]IPR037817Transcription initiation factor TFIID subunit 7Family
H [auth K]IPR009072Histone-foldHomologous Superfamily
H [auth K]IPR037818Transcription initiation factor TFIID subunit 8Family
H [auth K]IPR006565Bromodomain associated domainDomain
H [auth K]IPR019473Transcription factor TFIID, subunit 8, C-terminalDomain
I [auth L]IPR051431Transcription initiation factor TFIID subunit 9Family
I [auth L]IPR009072Histone-foldHomologous Superfamily
I [auth L]IPR003162Transcription initiation factor TAFII31Family

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP21675
J [auth O]PharosQ12962
K [auth R]PharosQ16514
L [auth T]PharosP20226
O [auth W]PharosP52655
P [auth X]PharosP52657
PharosQ6P1X5
C [auth D]PharosO00268
D [auth G]PharosQ15542
E [auth H]PharosP49848
F [auth I]PharosP49848
G [auth J]PharosQ15545
H [auth K]PharosQ7Z7C8
I [auth L]PharosQ16594