6PY8
Crystal structure of the RBPJ-NOTCH1-NRARP ternary complex bound to DNA
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth G] | Ank_2 | e6py8G1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
A [auth B] | Ank_2 | e6py8B1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
G [auth C] | TIG_7 | e6py8C3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: TIG_7 | ECOD (1.6) |
G [auth C] | LAG1-DNAbind | e6py8C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: LAG1-DNAbind | ECOD (1.6) |
G [auth C] | BTD | e6py8C2 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: BTD | ECOD (1.6) |
H [auth E] | TIG_7 | e6py8E2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: TIG_7 | ECOD (1.6) |
H [auth E] | LAG1-DNAbind | e6py8E1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: LAG1-DNAbind | ECOD (1.6) |
H [auth E] | BTD | e6py8E3 | A: beta duplicates or obligate multimers | X: beta-Trefoil (From Topology) | H: beta-Trefoil (From Topology) | T: beta-Trefoil | F: BTD | ECOD (1.6) |
J [auth K] | Ank_2 | e6py8K1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
I [auth F] | Ank_2 | e6py8F1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth G] | PF12796 | Ankyrin repeats (3 copies) (Ank_2) | Ankyrin repeats (3 copies) | - | Repeat |
G [auth C], H [auth E] | PF20144 | TIG domain (TIG_SUH) | TIG domain | This entry represents a TIG-like domain found in the suppressor of hairless protein. | Domain |
G [auth C], H [auth E] | PF09270 | Beta-trefoil DNA-binding domain (BTD) | Beta-trefoil DNA-binding domain | Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and ... | Domain |
G [auth C], H [auth E] | PF09271 | LAG1, DNA binding (LAG1-DNAbind) | LAG1, DNA binding | Members of this family are found in various eukaryotic hypothetical proteins and in the DNA-binding protein LAG-1. They adopt a beta sandwich structure, with nine strands in two beta-sheets, in a Greek-key topology, and allow for DNA binding [1]. Th ... | Domain |
I [auth F], J [auth K] | PF12796 | Ankyrin repeats (3 copies) (Ank_2) | Ankyrin repeats (3 copies) | - | Repeat |
I [auth F], J [auth K] | PF00023 | Ankyrin repeat (Ank) | Ankyrin repeat | - | Repeat |