Annotations: 6Q2N

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D [auth B]	SCOP2B Superfamily	Cystine-knot cytokines	8084508	3000846	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Cystine-knot cytokines	8084508	3000846	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth B]	TGF_beta	e6q2nB1	A: few secondary structure elements	X: Cystine-knot cytokines (From Topology)	H: Cystine-knot cytokines (From Topology)	T: Cystine-knot cytokines	F: TGF_beta	ECOD (1.6)
A	TGF_beta	e6q2nA1	A: few secondary structure elements	X: Cystine-knot cytokines (From Topology)	H: Cystine-knot cytokines (From Topology)	T: Cystine-knot cytokines	F: TGF_beta	ECOD (1.6)
E [auth D]	GDNF	e6q2nD1	A: alpha superhelices	X: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like	H: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA	T: GDNF receptor	F: GDNF	ECOD (1.6)
B [auth C]	GDNF	e6q2nC1	A: alpha superhelices	X: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like	H: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA	T: GDNF receptor	F: GDNF	ECOD (1.6)
C [auth E]	Cadherin_4	e6q2nE1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cadherin_4	ECOD (1.6)
C [auth E]	EUF07683	e6q2nE4	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07683	ECOD (1.6)
C [auth E]	Cadherin_repeat_like	e6q2nE3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cadherin_repeat_like	ECOD (1.6)
C [auth E]	Cadherin	e6q2nE2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cadherin	ECOD (1.6)
F	Cadherin_4	e6q2nF1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cadherin_4	ECOD (1.6)
F	EUF07683	e6q2nF4	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: EUF07683	ECOD (1.6)
F	Cadherin_repeat_like	e6q2nF3	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cadherin_repeat_like	ECOD (1.6)
F	Cadherin	e6q2nF2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Cadherin	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, D [auth B]	PF00019	Transforming growth factor beta like domain (TGF_beta)	Transforming growth factor beta like domain	-	Domain
B [auth C], E [auth D]	PF02351	GDNF/GAS1 domain (GDNF)	GDNF/GAS1 domain	This cysteine rich domain is found in multiple copies in GNDF and GAS1 proteins. GDNF and neurturin (NTN) receptors are potent survival factors for sympathetic, sensory and central nervous system neurons [2]. GDNF and neurturin promote neuronal surv ...	This cysteine rich domain is found in multiple copies in GNDF and GAS1 proteins. GDNF and neurturin (NTN) receptors are potent survival factors for sympathetic, sensory and central nervous system neurons [2]. GDNF and neurturin promote neuronal survival by signaling through similar multicomponent receptors that consist of a common receptor tyrosine kinase and a member of a GPI-linked family of receptors that determines ligand specificity [3].	Domain
C [auth E], F	PF00028	Cadherin domain (Cadherin)	Cadherin domain	-	Domain
C [auth E], F	PF22540	RET, Cysteine Rich Domain (RET_CRD)	RET, Cysteine Rich Domain	RET is a single transmembrane-spanning receptor tyrosine kinase (RTK) that plays critical roles in the development of vertebrates. Structural analysis indicate that the ligand-binding RET ectodomain (RET-ECD) contains four consecutive cadherin-like d ...	RET is a single transmembrane-spanning receptor tyrosine kinase (RTK) that plays critical roles in the development of vertebrates. Structural analysis indicate that the ligand-binding RET ectodomain (RET-ECD) contains four consecutive cadherin-like domains (CLD1-CLD4) followed by a membrane-proximal cysteine-rich domain (CRD). This entry relates to the Cysteine Rich Domain (CRD) domain [1,2].	Domain
C [auth E], F	PF17813	RET Cadherin like domain 4 (RET_CLD4)	RET Cadherin like domain 4	RET is a single transmembrane-spanning receptor tyrosine kinase (RTK) that plays critical roles in the development of vertebrates. Structural analysis indicate that the ligand-binding RET ectodomain (RET-ECD) contains four consecutive cadherin-like d ...	RET is a single transmembrane-spanning receptor tyrosine kinase (RTK) that plays critical roles in the development of vertebrates. Structural analysis indicate that the ligand-binding RET ectodomain (RET-ECD) contains four consecutive cadherin-like domains (CLD1-CLD4) followed by a membrane-proximal cysteine-rich domain (CRD). This entry relates to CLD4 which is required for CRD folding [1].	Domain
C [auth E], F	PF17756	RET Cadherin like domain 1 (RET_CLD1)	RET Cadherin like domain 1	RET is a single transmembrane-spanning receptor tyrosine kinase (RTK) that plays critical roles in the development of vertebrates. Structural analysis indicate that RET contains four consecutive cadherin-like domains (CLD). This entry relates to the ...	RET is a single transmembrane-spanning receptor tyrosine kinase (RTK) that plays critical roles in the development of vertebrates. Structural analysis indicate that RET contains four consecutive cadherin-like domains (CLD). This entry relates to the first CLD at the N-terminal. Several regions within RET-CLD1 have been shown to be important for ligand-coreceptor binding. CLD1 and CLD2 have a distinctive clamshell shape and CLD1 is essential for CLD2 folding. CLD1 contains 2 sites for GDNF receptor alpha 1 binding [1].	Domain
C [auth E], F	PF17812	RET Cadherin like domain 3 (RET_CLD3)	RET Cadherin like domain 3	RET is a single transmembrane-spanning receptor tyrosine kinase (RTK) that plays critical roles in the development of vertebrates. Structural analysis indicate that RET contains four consecutive cadherin-like domains (CLD). This entry relates to CLD3 ...	RET is a single transmembrane-spanning receptor tyrosine kinase (RTK) that plays critical roles in the development of vertebrates. Structural analysis indicate that RET contains four consecutive cadherin-like domains (CLD). This entry relates to CLD3. Classical cadherin calcium-coordinating motifs can be found between CLD2 and CLD3 [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, D [auth B]	Glial cell line-derived neurotrophic factor	protein binding binding molecular function activator activity signaling receptor binding molecular function regulator activity signaling receptor regulator activity growth factor activity receptor ligand activity signaling receptor activator activity chemoattractant activity involved in axon guidance chemoattractant activity protein tyrosine kinase binding kinase binding receptor tyrosine kinase binding protein binding binding molecular function activator activity signaling receptor binding molecular function regulator activity signaling receptor regulator activity growth factor activity receptor ligand activity signaling receptor activator activity chemoattractant activity involved in axon guidance chemoattractant activity protein tyrosine kinase binding kinase binding receptor tyrosine kinase binding enzyme binding protein kinase binding growth factor receptor binding glial cell-derived neurotrophic factor receptor binding identical protein binding protein homodimerization activity protein dimerization activity	developmental process regulation of biological process regulation of cellular process regulation of developmental process cellular developmental process biological regulation regulation of cell differentiation stem cell differentiation cell differentiation regulation of stem cell differentiation cellular process regulation of biosynthetic process cellular biosynthetic process cellular metabolic process developmental process regulation of biological process regulation of cellular process regulation of developmental process cellular developmental process biological regulation regulation of cell differentiation stem cell differentiation cell differentiation regulation of stem cell differentiation cellular process regulation of biosynthetic process cellular biosynthetic process cellular metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process multicellular organism development multicellular organismal process anatomical structure development sympathetic nervous system development autonomic nervous system development nervous system development system development spinal cord development central nervous system development dorsal spinal cord development positive regulation of biological process positive regulation of developmental process positive regulation of cell differentiation positive regulation of cellular process regulation of molecular function positive regulation of molecular function regulation of monooxygenase activity positive regulation of monooxygenase activity regulation of catalytic activity positive regulation of catalytic activity regulation of oxidoreductase activity positive regulation of oxidoreductase activity animal organ development embryonic organ development embryo development metanephros development kidney development renal system development kidney epithelium development renal vesicle morphogenesis epithelial cell differentiation regulation of epithelial cell differentiation metanephros morphogenesis regulation of epithelial cell differentiation involved in kidney development animal organ morphogenesis nephron development epithelium development tissue development positive regulation of epithelial cell differentiation nephron morphogenesis nephron epithelium morphogenesis regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis metanephric renal vesicle morphogenesis renal vesicle development positive regulation of epithelial cell differentiation involved in kidney development positive regulation of morphogenesis of an epithelium regulation of morphogenesis of an epithelium regulation of multicellular organismal process metanephric nephron development regulation of anatomical structure morphogenesis mesenchymal to epithelial transition involved in metanephros morphogenesis epithelial cell differentiation involved in kidney development nephron epithelium development regulation of multicellular organismal development morphogenesis of an epithelium mesenchymal to epithelial transition positive regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis metanephric nephron morphogenesis cell differentiation involved in metanephros development tissue morphogenesis anatomical structure morphogenesis kidney morphogenesis cell differentiation involved in kidney development specification of animal organ identity pattern specification process developmental induction animal organ formation regulation of animal organ morphogenesis regionalization positive regulation of animal organ morphogenesis anatomical structure formation involved in morphogenesis positive regulation of multicellular organismal process regulation of animal organ formation organ induction mesonephric epithelium development branching morphogenesis of an epithelial tube nephron tubule morphogenesis nephron tubule development ureteric bud morphogenesis tube morphogenesis branching involved in ureteric bud morphogenesis renal tubule development epithelial tube morphogenesis ureteric bud development tube development mesonephros development morphogenesis of a branching structure mesonephric tubule morphogenesis mesonephric tubule development renal tubule morphogenesis morphogenesis of a branching epithelium positive regulation of DNA-templated transcription RNA metabolic process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II positive regulation of nucleobase-containing compound metabolic process primary metabolic process positive regulation of transcription by RNA polymerase II nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process regulation of DNA-templated transcription positive regulation of cellular biosynthetic process plasma membrane bounded cell projection organization cell projection organization cell development neuron projection development cellular component organization generation of neurons neurogenesis neuron differentiation neuron development cellular component organization or biogenesis cellular response to stimulus regulation of signaling response to stimulus cell surface receptor signaling pathway signaling semaphorin-plexin signaling pathway regulation of signal transduction cell communication regulation of semaphorin-plexin signaling pathway regulation of response to stimulus regulation of cell communication signal transduction system process smooth muscle contraction phasic smooth muscle contraction muscle contraction peristalsis muscle system process embryonic epithelial tube formation tube formation epithelial tube formation nephron tubule formation morphogenesis of embryonic epithelium mesonephric tubule formation embryonic morphogenesis ureteric bud formation adult locomotory behavior behavior adult behavior locomotory behavior negative regulation of extrinsic apoptotic signaling pathway in absence of ligand signal transduction in absence of ligand negative regulation of signaling negative regulation of biological process regulation of programmed cell death negative regulation of cell communication extrinsic apoptotic signaling pathway negative regulation of signal transduction in absence of ligand negative regulation of extrinsic apoptotic signaling pathway negative regulation of apoptotic signaling pathway negative regulation of cellular process extrinsic apoptotic signaling pathway in absence of ligand negative regulation of response to stimulus negative regulation of programmed cell death regulation of apoptotic process cell death negative regulation of signal transduction regulation of extrinsic apoptotic signaling pathway apoptotic signaling pathway negative regulation of apoptotic process regulation of extrinsic apoptotic signaling pathway in absence of ligand apoptotic process programmed cell death regulation of apoptotic signaling pathway regulation of kidney development regulation of branching involved in ureteric bud morphogenesis regulation of morphogenesis of a branching structure positive regulation of branching involved in ureteric bud morphogenesis monoamine transport regulation of localization import into cell regulation of catecholamine uptake involved in synaptic transmission cellular localization nitrogen compound transport transport organic hydroxy compound transport catecholamine uptake dopamine transport localization dopamine uptake involved in synaptic transmission synaptic signaling catecholamine transport establishment of localization in cell regulation of dopamine uptake involved in synaptic transmission neurotransmitter reuptake regulation of neurotransmitter uptake trans-synaptic signaling regulation of transport catecholamine uptake involved in synaptic transmission regulation of neurotransmitter transport cell-cell signaling neurotransmitter transport establishment of localization chemical synaptic transmission amine transport anterograde trans-synaptic signaling neurotransmitter uptake regulation of amine transport synaptic transmission, dopaminergic dopamine uptake regulation of catecholamine secretion positive regulation of secretion by cell positive regulation of amine transport secretion by cell regulation of secretion by cell positive regulation of secretion signal release secretion positive regulation of catecholamine secretion export from cell dopamine secretion positive regulation of dopamine secretion regulation of secretion catecholamine secretion positive regulation of transport regulation of dopamine secretion stem cell development neural crest cell differentiation neural crest cell development mesenchyme development mesenchymal cell migration ameboidal-type cell migration cell migration mesenchymal cell differentiation cell motility neural crest cell migration neuron apoptotic process negative regulation of neuron apoptotic process regulation of neuron apoptotic process commissural neuron axon guidance axonogenesis plasma membrane bounded cell projection morphogenesis cell morphogenesis cell projection morphogenesis neuron projection morphogenesis axon guidance axon development cell morphogenesis involved in neuron differentiation neuron projection guidance negative regulation of cellular metabolic process post-transcriptional regulation of gene expression negative regulation of nucleobase-containing compound metabolic process regulation of biological quality RNA catabolic process mRNA stabilization mRNA catabolic process negative regulation of metabolic process negative regulation of cellular biosynthetic process nucleobase-containing compound catabolic process negative regulation of gene expression negative regulation of macromolecule biosynthetic process nucleic acid catabolic process negative regulation of RNA metabolic process catabolic process macromolecule catabolic process negative regulation of mRNA metabolic process regulation of mRNA catabolic process negative regulation of macromolecule metabolic process negative regulation of catabolic process negative regulation of mRNA catabolic process negative regulation of RNA catabolic process regulation of catabolic process mRNA metabolic process regulation of mRNA stability RNA stabilization negative regulation of biosynthetic process positive regulation of gene expression regulation of RNA stability regulation of mRNA metabolic process membrane organization cell junction organization postsynapse organization synapse organization postsynaptic membrane organization parasympathetic nervous system development peripheral nervous system development postganglionic parasympathetic fiber development cell population proliferation positive regulation of cell population proliferation regulation of cell population proliferation cell surface receptor protein tyrosine kinase signaling pathway glial cell-derived neurotrophic factor receptor signaling pathway enzyme-linked receptor protein signaling pathway enteric nervous system development regulation of epithelial tube formation regulation of mesonephros development positive regulation of epithelial tube formation positive regulation of ureteric bud formation regulation of ureteric bud formation	membrane-bounded organelle intracellular organelle intracellular anatomical structure Golgi apparatus organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle endomembrane system extracellular region extracellular space
B [auth C], E [auth D]	GDNF family receptor alpha-1	molecular transducer activity signaling receptor activity protein binding binding signaling receptor binding transmembrane signaling receptor activity cytokine receptor activity immune receptor activity glial cell-derived neurotrophic factor receptor activity cell adhesion molecule binding protein-containing complex binding integrin binding neurotrophin receptor activity	developmental process multicellular organismal process gonad development reproductive system development reproductive process sex differentiation animal organ development developmental process involved in reproduction male gonad development male sex differentiation multicellular organism development development of primary male sexual characteristics development of primary sexual characteristics anatomical structure development reproductive structure development developmental process multicellular organismal process gonad development reproductive system development reproductive process sex differentiation animal organ development developmental process involved in reproduction male gonad development male sex differentiation multicellular organism development development of primary male sexual characteristics development of primary sexual characteristics anatomical structure development reproductive structure development system development cell migration cellular process cell motility cellular response to stimulus regulation of biological process regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation signal transduction cell communication nervous system development cell surface receptor protein tyrosine kinase signaling pathway glial cell-derived neurotrophic factor receptor signaling pathway enzyme-linked receptor protein signaling pathway kidney development renal system development plasma membrane bounded cell projection organization cellular developmental process cell projection organization cell development neuron projection development cellular component organization generation of neurons neurogenesis neuron differentiation cell differentiation neuron development cellular component organization or biogenesis regulation of protein modification process positive regulation of phosphorylation regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of biological process positive regulation of cellular metabolic process peptidyl-tyrosine modification positive regulation of phosphate metabolic process regulation of primary metabolic process positive regulation of metabolic process positive regulation of peptidyl-tyrosine phosphorylation positive regulation of protein modification process regulation of phosphate metabolic process peptidyl-amino acid modification phosphate-containing compound metabolic process positive regulation of macromolecule metabolic process protein metabolic process protein modification process phosphorus metabolic process positive regulation of protein phosphorylation positive regulation of cellular process protein phosphorylation positive regulation of phosphorus metabolic process phosphorylation cellular metabolic process regulation of protein metabolic process regulation of peptidyl-tyrosine phosphorylation primary metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process macromolecule modification metabolic process regulation of phosphorylation regulation of phosphorus metabolic process macromolecule metabolic process peptidyl-tyrosine phosphorylation regulation of metabolic process	cell periphery cell surface membrane plasma membrane cellular anatomical entity external side of plasma membrane side of membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space cell periphery cell surface membrane plasma membrane cellular anatomical entity external side of plasma membrane side of membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle extrinsic component of membrane intracellular anatomical structure endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle late endosome cytoplasm multivesicular body protein-containing complex receptor complex Golgi apparatus plasma membrane protein complex membrane protein complex somatodendritic compartment cell body neuronal cell body axon cell projection neuron projection plasma membrane bounded cell projection
C [auth E], F	Proto-oncogene tyrosine-protein kinase receptor Ret	molecular transducer activity catalytic activity, acting on a protein kinase activity protein kinase activity signaling receptor activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein tyrosine kinase activity transmembrane receptor protein tyrosine kinase activity transmembrane receptor protein kinase activity transmembrane signaling receptor activity catalytic activity binding molecular transducer activity catalytic activity, acting on a protein kinase activity protein kinase activity signaling receptor activity transferase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups protein tyrosine kinase activity transmembrane receptor protein tyrosine kinase activity transmembrane receptor protein kinase activity transmembrane signaling receptor activity catalytic activity binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding calcium ion binding metal ion binding	response to stimulus response to chemical response to xenobiotic stimulus regulation of biological process cell adhesion regulation of cellular process regulation of cell adhesion biological regulation cellular process developmental process multicellular organismal process morphogenesis of embryonic epithelium embryonic epithelial tube formation epithelium development response to stimulus response to chemical response to xenobiotic stimulus regulation of biological process cell adhesion regulation of cellular process regulation of cell adhesion biological regulation cellular process developmental process multicellular organismal process morphogenesis of embryonic epithelium embryonic epithelial tube formation epithelium development tube development embryonic morphogenesis morphogenesis of an epithelium tube formation tissue development embryo development epithelial tube formation tissue morphogenesis anatomical structure morphogenesis multicellular organism development tube morphogenesis anatomical structure development anatomical structure formation involved in morphogenesis epithelial tube morphogenesis cellular response to stimulus cell surface receptor signaling pathway signaling GDF15-GFRAL signaling pathway cell surface receptor protein tyrosine kinase signaling pathway cell communication cellular response to stress response to stress glial cell-derived neurotrophic factor receptor signaling pathway signal transduction enzyme-linked receptor protein signaling pathway positive regulation of cell communication positive regulation of signal transduction signal transduction in absence of ligand positive regulation of biological process regulation of signal transduction regulation of programmed cell death positive regulation of extrinsic apoptotic signaling pathway in absence of ligand extrinsic apoptotic signaling pathway positive regulation of apoptotic signaling pathway positive regulation of response to stimulus extrinsic apoptotic signaling pathway in absence of ligand positive regulation of cellular process regulation of signaling positive regulation of programmed cell death regulation of apoptotic process positive regulation of extrinsic apoptotic signaling pathway cell death positive regulation of apoptotic process regulation of extrinsic apoptotic signaling pathway apoptotic signaling pathway regulation of response to stimulus regulation of extrinsic apoptotic signaling pathway in absence of ligand regulation of cell communication apoptotic process programmed cell death regulation of apoptotic signaling pathway positive regulation of signaling cellular biosynthetic process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of biosynthetic process cellular metabolic process regulation of cellular metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of cellular biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of cellular biosynthetic process sensory organ development eye development animal organ development retina development in camera-type eye visual system development camera-type eye development sensory system development system development positive regulation of metanephric glomerulus development regulation of developmental process metanephric glomerulus development regulation of kidney development renal system development positive regulation of developmental process metanephros development regulation of glomerulus development regulation of multicellular organismal process nephron development metanephric nephron development regulation of metanephric glomerulus development positive regulation of glomerulus development positive regulation of kidney development glomerulus development positive regulation of multicellular organismal process regulation of metanephros development kidney development positive regulation of metanephros development proteolysis membrane protein proteolysis primary metabolic process protein metabolic process response to lipid response to oxygen-containing compound cellular response to oxygen-containing compound response to retinoic acid cellular response to chemical stimulus cellular response to retinoic acid cellular response to lipid ureter development developmental maturation ureter maturation anatomical structure maturation animal organ maturation intracellular signal transduction intracellular signaling cassette MAPK cascade regulation of neuron projection development regulation of cellular component organization positive regulation of cellular component organization cellular developmental process cell projection organization cell development neuron projection development cellular component organization neurogenesis neuron differentiation positive regulation of neuron projection development cell differentiation positive regulation of cell projection organization cellular component organization or biogenesis plasma membrane bounded cell projection organization regulation of cell projection organization nervous system development generation of neurons neuron development regulation of plasma membrane bounded cell projection organization cell-cell adhesion neuron cell-cell adhesion protein phosphorylation phosphorylation macromolecule modification phosphate-containing compound metabolic process protein modification process phosphorus metabolic process leukocyte migration lymphocyte migration into lymphoid organs immune system process mononuclear cell migration lymphocyte migration cell migration cell motility cell-cell adhesion via plasma-membrane adhesion molecules homophilic cell adhesion via plasma membrane adhesion molecules regulation of cell differentiation positive regulation of cell maturation regulation of neuron maturation regulation of cell development positive regulation of cell differentiation cell maturation regulation of cell maturation positive regulation of neuron maturation positive regulation of cell development neuron maturation regulation of neuron differentiation multicellular organismal response to stress response to pain immune system development hematopoietic or lymphoid organ development Peyer's patch morphogenesis Peyer's patch development mucosa-associated lymphoid tissue development axonogenesis plasma membrane bounded cell projection morphogenesis cell morphogenesis cell projection morphogenesis neuron projection morphogenesis regulation of axonogenesis regulation of anatomical structure morphogenesis axon development cell morphogenesis involved in neuron differentiation regulation of catalytic activity positive regulation of protein metabolic process positive regulation of peptidase activity positive regulation of cysteine-type endopeptidase activity involved in apoptotic process regulation of primary metabolic process positive regulation of molecular function regulation of cysteine-type endopeptidase activity involved in apoptotic process regulation of proteolysis regulation of endopeptidase activity activation of cysteine-type endopeptidase activity involved in apoptotic process regulation of cysteine-type endopeptidase activity regulation of protein metabolic process regulation of peptidase activity positive regulation of catalytic activity regulation of molecular function positive regulation of hydrolase activity positive regulation of cysteine-type endopeptidase activity regulation of hydrolase activity positive regulation of endopeptidase activity positive regulation of proteolysis digestive system development posterior midgut development midgut development digestive tract development regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction regulation of intracellular signal transduction positive regulation of intracellular signal transduction positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction phosphatidylinositol 3-kinase/protein kinase B signal transduction stem cell development neural crest cell differentiation neural crest cell development mesenchyme development mesenchymal cell migration stem cell differentiation ameboidal-type cell migration mesenchymal cell differentiation neural crest cell migration positive regulation of cell adhesion mediated by integrin positive regulation of cell adhesion regulation of cell adhesion mediated by integrin cell adhesion mediated by integrin ureteric bud development mesonephric epithelium development kidney epithelium development mesonephros development mesonephric tubule development positive regulation of MAPK cascade regulation of MAPK cascade axon guidance neuron projection guidance positive regulation of locomotion regulation of cell motility positive regulation of cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration locomotion positive regulation of DNA-templated transcription RNA metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process positive regulation of nucleobase-containing compound metabolic process nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process regulation of DNA-templated transcription enteric nervous system development autonomic nervous system development positive regulation of cell size regulation of cellular component size regulation of biological quality regulation of cell size regulation of anatomical structure size nerve development innervation positive regulation of phosphorylation regulation of peptidyl-serine phosphorylation positive regulation of phosphate metabolic process regulation of phosphate metabolic process peptidyl-amino acid modification regulation of receptor signaling pathway via JAK-STAT positive regulation of protein phosphorylation positive regulation of peptidyl-serine phosphorylation of STAT protein positive regulation of phosphorus metabolic process serine phosphorylation of STAT protein regulation of phosphorus metabolic process regulation of receptor signaling pathway via STAT cell surface receptor signaling pathway via STAT regulation of protein modification process regulation of protein phosphorylation regulation of peptidyl-serine phosphorylation of STAT protein peptidyl-serine modification positive regulation of protein modification process peptidyl-serine phosphorylation positive regulation of peptidyl-serine phosphorylation regulation of phosphorylation cell surface receptor signaling pathway via JAK-STAT	somatodendritic compartment cell projection dendrite dendritic tree neuron projection cellular anatomical entity plasma membrane bounded cell projection protein-containing complex receptor complex cell periphery plasma membrane protein complex membrane plasma membrane membrane protein complex somatodendritic compartment cell projection dendrite dendritic tree neuron projection cellular anatomical entity plasma membrane bounded cell projection protein-containing complex receptor complex cell periphery plasma membrane protein complex membrane plasma membrane membrane protein complex endosome membrane membrane-bounded organelle intracellular anatomical structure endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle organelle cytoplasm vesicle organelle membrane cell body neuronal cell body axon early endosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, D [auth B]	IPR016649	Glial cell line-derived neurotrophic factor	Family
A, D [auth B]	IPR029034	Cystine-knot cytokine	Homologous Superfamily
A, D [auth B]	IPR047020	Glial cell line-derived neurotrophic factor, TGF-beta-like domain	Domain
A, D [auth B]	IPR043401	Glial cell line-derived neurotrophic factor family	Family
A, D [auth B]	IPR001839	Transforming growth factor-beta, C-terminal	Domain
B [auth C], E [auth D]	IPR017372	Glial cell line-derived neurotrophic factor receptor, alpha 1/2	Family
B [auth C], E [auth D]	IPR003503	Glial cell line-derived neurotrophic factor receptor, alpha 1	Family
B [auth C], E [auth D]	IPR037193	GDNF receptor alpha	Homologous Superfamily
B [auth C], E [auth D]	IPR003438	Glial cell line-derived neurotrophic factor receptor	Family
B [auth C], E [auth D]	IPR016017	GDNF/GAS1	Domain
C [auth E], F	IPR008266	Tyrosine-protein kinase, active site	Active Site
C [auth E], F	IPR020635	Tyrosine-protein kinase, catalytic domain	Domain
C [auth E], F	IPR015919	Cadherin-like superfamily	Homologous Superfamily
C [auth E], F	IPR041317	RET, cadherin-like domain 4	Domain
C [auth E], F	IPR016249	Tyrosine-protein kinase, Ret receptor	Family
C [auth E], F	IPR000719	Protein kinase domain	Domain
C [auth E], F	IPR041163	Ret, cadherin like domain 1	Domain
C [auth E], F	IPR002126	Cadherin-like	Domain
C [auth E], F	IPR017441	Protein kinase, ATP binding site	Binding Site
C [auth E], F	IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	Domain
C [auth E], F	IPR040667	Tyrosine-protein kinase receptor Ret, cadherin like domain 3	Domain
C [auth E], F	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily
C [auth E], F	IPR050122	Receptor Tyrosine Kinase	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, D [auth B]	Pharos: P39905	Hirschsprung disease congenital central hypoventilation syndrome phaeochromocytoma Huntington disease retinal degeneration ependymoma oligodendroglioma glioblastoma Parkinson disease malignant glioma status epilepticus childhood oligodendroglioma secondary Parkinson disease Neurologic Manifestations giant cell glioblastoma Hirschsprung disease congenital central hypoventilation syndrome phaeochromocytoma Huntington disease retinal degeneration ependymoma oligodendroglioma glioblastoma Parkinson disease malignant glioma status epilepticus childhood oligodendroglioma secondary Parkinson disease Neurologic Manifestations giant cell glioblastoma papillary ependymoma cocaine abuse myxopapillary ependymoma amphetamine abuse cellular ependymoma cocaine dependence mixed glioma adult oligodendroglioma oligoastrocytoma Hirschsprung disease, susceptibility to, 3 bowel dysfunction large cell medulloblastoma adrenal gland pheochromocytoma extra-adrenal sympathetic paraganglioma parkinsonian disorder autosomal recessive juvenile Parkinson disease 2 intestinal disease major depressive disorder cystic fibrosis adrenal medulla cancer drug-induced dyskinesia anaplastic ependymoma bipolar disorder juvenile Huntington disease schizophrenia congenital anomaly of kidney and urinary tract neurodegenerative disease osteosarcoma anaplastic oligodendroglioma glioma benign neoplasm of adrenal gland
B [auth C], E [auth D]	Pharos: P56159	Liver Cirrhosis, Experimental neuralgia ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis atopic eczema ductal breast carcinoma in situ invasive ductal breast carcinoma malignant colon neoplasm medulloblastoma pancreatic ductal adenocarcinoma schizophrenia breast carcinoma Hirschsprung disease malignant ependymoma Liver Cirrhosis, Experimental neuralgia ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia psoriasis atopic eczema ductal breast carcinoma in situ invasive ductal breast carcinoma malignant colon neoplasm medulloblastoma pancreatic ductal adenocarcinoma schizophrenia breast carcinoma Hirschsprung disease malignant ependymoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm pilocytic astrocytoma cystic fibrosis interstitial cystitis lung cancer malignant mesothelioma
C [auth E], F	Pharos: P07949	Hirschsprung disease multiple endocrine neoplasia type 2A multiple endocrine neoplasia type 2B medullary thyroid gland carcinoma phaeochromocytoma congenital central hypoventilation syndrome multiple endocrine neoplasia familial medullary thyroid carcinoma Hirschsprung disease, susceptibility to, 1 status epilepticus Burkitt lymphoma colorectal cancer cancer thyroid gland papillary carcinoma thyroid adenoma Hirschsprung disease multiple endocrine neoplasia type 2A multiple endocrine neoplasia type 2B medullary thyroid gland carcinoma phaeochromocytoma congenital central hypoventilation syndrome multiple endocrine neoplasia familial medullary thyroid carcinoma Hirschsprung disease, susceptibility to, 1 status epilepticus Burkitt lymphoma colorectal cancer cancer thyroid gland papillary carcinoma thyroid adenoma thyroid gland carcinoma non-small cell lung carcinoma Pheochromocytoma thyroid cancer paraganglioma medulloblastoma colorectal carcinoma endometrial carcinoma ovarian cancer adenoma hereditary amyloidosis pituitary cancer atypical teratoid rhabdoid tumor large cell medulloblastoma renal cell carcinoma bladder transitional cell carcinoma malignant ependymoma breast carcinoma melanoma colorectal adenocarcinoma extra-adrenal sympathetic paraganglioma adrenal gland pheochromocytoma familial nonmedullary thyroid carcinoma Haddad syndrome psoriasis benign neoplasm of adrenal gland intellectual disability lung cancer renal hypodysplasia/aplasia 1 bowel dysfunction malignant glioma thyroid gland follicular carcinoma neuroendocrine carcinoma cutaneous melanoma osteosarcoma adrenal medulla cancer gastrointestinal stromal tumor hepatocellular carcinoma astrocytic tumor renal agenesis, unilateral intestinal disease lung disease breast cancer thymic carcinoma