6QE6
Structure of M. capricolum TrmK in complex with the natural cofactor product S-adenosyl-homocysteine (SAH)
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TrmK | e6qe6A2 | A: alpha bundles | X: Long alpha-hairpin | H: Helical hairpin in putative tRNA methyltransferase (From Topology) | T: Helical hairpin in putative tRNA methyltransferase | F: TrmK | ECOD (1.6) |
A | Methyltransf_18 | e6qe6A1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltransf_18 | ECOD (1.6) |
B | TrmK | e6qe6B2 | A: alpha bundles | X: Long alpha-hairpin | H: Helical hairpin in putative tRNA methyltransferase (From Topology) | T: Helical hairpin in putative tRNA methyltransferase | F: TrmK | ECOD (1.6) |
B | Methyltransf_18 | e6qe6B1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: Methyltransf_18 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF04816 | tRNA (adenine(22)-N(1))-methyltransferase (TrmK) | tRNA (adenine(22)-N(1))-methyltransferase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
tRNA (Adenine(22)-N(1))-methyltransferase |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily | |
IPR006901 | tRNA methyltransferase TrmK | Family |