6QJ4

Crystal structure of the C. thermophilum condensin Ycs4-Brn1 subcomplex bound to the Smc4 ATPase head in complex with the C-terminal domain of Brn1


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AHEAT_2e6qj4A1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: HEAT_2ECOD (1.6)
CSMC_Ne6qj4C1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: SMC_NECOD (1.6)
EUNK_F_TYPEe6qj4E1 A: alpha arraysX: HTHH: HTHT: wingedF: UNK_F_TYPEECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF12717non-SMC mitotic condensation complex subunit 1 (Cnd1)non-SMC mitotic condensation complex subunit 1- Repeat
PF12922non-SMC mitotic condensation complex subunit 1, N-term (Cnd1_N)non-SMC mitotic condensation complex subunit 1, N-term- Repeat
PF02463RecF/RecN/SMC N terminal domain (SMC_N)RecF/RecN/SMC N terminal domainThis domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. T ...This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics [1]. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Condensin complex subunit 1,Condensin complex subunit 1,Condensin complex subunit 1
Condensin complex subunit 2
Uncharacterized protein,Uncharacterized protein
Brn1---
Condensin complex subunit 2