Structure of XBP1u-paused ribosome nascent chain complex (post-state)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| V [auth Q] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8095982 | 3001045 | SCOP2B (2022-06-29) |
| CA [auth X] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8095966 | 3000210 | SCOP2B (2022-06-29) |
| GC [auth AA] | SCOP2B Superfamily | Ribosomal protein S30e-like | 8053455 | 3002190 | SCOP2B (2022-06-29) |
| I [auth C] | SCOP2B Superfamily | Ribosomal protein L4 | 8052829 | 3001146 | SCOP2B (2022-06-29) |
| I [auth C] | SCOP2B Superfamily | 60S ribosomal protein L4 C-terminal domain-like | 8052828 | 3002143 | SCOP2B (2022-06-29) |
| CC [auth 9] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052584 | 3000068 | SCOP2B (2022-06-29) |
| BC [auth FF] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8095265 | 3000135 | SCOP2B (2022-06-29) |
| H [auth B] | SCOP2B Superfamily | Translational proteins | 8078357 | 3000811 | SCOP2B (2022-06-29) |
| YB [auth OO] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8090991 | 3000034 | SCOP2B (2022-06-29) |
| VB [auth TT] | SCOP2B Superfamily | Ribosomal protein S8 | 8079081 | 3000709 | SCOP2B (2022-06-29) |
| SB [auth PP] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8089322 | 3000034 | SCOP2B (2022-06-29) |
| RB [auth II] | SCOP2B Superfamily | S13-like H2TH domain | 8101439 | 3000053 | SCOP2B (2022-06-29) |
| PB [auth UU] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8082683 | 3000100 | SCOP2B (2022-06-29) |
| NB [auth MM] | SCOP2B Superfamily | Translational machinery components | 8097824 | 3000571 | SCOP2B (2022-06-29) |
| MB [auth QQ] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8052971 | 3001284 | SCOP2B (2022-06-29) |
| MB [auth QQ] | SCOP2B Superfamily | Homeodomain-like | 8052970 | 3000001 | SCOP2B (2022-06-29) |
| LB [auth RR] | SCOP2B Superfamily | L30e-like | 8063980 | 3001739 | SCOP2B (2022-06-29) |
| KB [auth EE] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052707 | 3000135 | SCOP2B (2022-06-29) |
| KB [auth EE] | SCOP2B Superfamily | Ribosomal S17 N-terminal domain-like | 8052708 | 3002138 | SCOP2B (2022-06-29) |
| JB [auth SS] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8055720 | 3000034 | SCOP2B (2022-06-29) |
| HB [auth CC] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8053075 | 3000433 | SCOP2B (2022-06-29) |
| EB [auth y] | SCOP2B Superfamily | Ribosomal protein S7 | 8066001 | 3000799 | SCOP2B (2022-06-29) |
| DB [auth x] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052746 | 3000135 | SCOP2B (2022-06-29) |
| DB [auth x] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8052745 | 3001473 | SCOP2B (2022-06-29) |
| DB [auth x] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8052747 | 3000334 | SCOP2B (2022-06-29) |
| AB [auth u] | SCOP2B Superfamily | Ribosomal S3Ae-like | 8053216 | 3002166 | SCOP2B (2022-06-29) |
| UA [auth p] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8101435 | 3001320 | SCOP2B (2022-06-29) |
| QA [auth l] | SCOP2B Superfamily | Ribosomal protein L39e | 8095597 | 3001756 | SCOP2B (2022-06-29) |
| NA [auth i] | SCOP2B Superfamily | Ribosomal protein L36e | 8053119 | 3002161 | SCOP2B (2022-06-29) |
| LA [auth g] | SCOP2B Superfamily | Ribosomal protein L34e-like | 8103328 | 3002203 | SCOP2B (2022-06-29) |
| KA [auth f] | SCOP2B Superfamily | Translational proteins | 8093714 | 3000811 | SCOP2B (2022-06-29) |
| JA [auth e] | SCOP2B Superfamily | Ribosomal protein L32e | 8102088 | 3000982 | SCOP2B (2022-06-29) |
| HA [auth c] | SCOP2B Superfamily | L30e-like | 8094953 | 3001739 | SCOP2B (2022-06-29) |
| FA [auth a] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8097818 | 3001045 | SCOP2B (2022-06-29) |
| EA [auth Z] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8053047 | 3000334 | SCOP2B (2022-06-29) |
| DA [auth Y] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8076754 | 3000334 | SCOP2B (2022-06-29) |
| AA [auth V] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8072048 | 3000433 | SCOP2B (2022-06-29) |
| S [auth N] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8082477 | 3000210 | SCOP2B (2022-06-29) |
| P [auth J] | SCOP2B Superfamily | RL5-like | 8073894 | 3001709 | SCOP2B (2022-06-29) |
| O [auth I] | SCOP2B Superfamily | Ribosomal protein L16p/L10e | 8097320 | 3000884 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| M [auth G] | e6r5qG1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| N [auth H] | e6r5qH1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| Q [auth L] | e6r5qL1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| V [auth Q] | e6r5qQ1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| CA [auth X] | e6r5qX1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| OB [auth WW] | e6r5qWW1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| ZB [auth LL] | e6r5qLL1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| GC [auth AA] | e6r5qAA1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| I [auth C] | e6r5qC1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Class I glutamine amidotransferase-like | T: Ephrin_lbd | F: | ECOD (20:10:01) | |
| FC [auth 6] | e6r5q61 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| EC [auth 0] | e6r5q01 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| CC [auth 9] | e6r5q91 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| BC [auth FF] | e6r5qFF1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| H [auth B] | e6r5qB1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| AC [auth JJ] | e6r5qJJ1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| YB [auth OO] | e6r5qOO1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| XB [auth NN] | e6r5qNN1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| WB [auth VV] | e6r5qVV1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| VB [auth TT] | e6r5qTT1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| UB [auth HH] | e6r5qHH1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| TB [auth GG] | e6r5qGG1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| SB [auth PP] | e6r5qPP1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| RB [auth II] | e6r5qII1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| G [auth A] | e6r5qA1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| QB [auth KK] | e6r5qKK1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| PB [auth UU] | e6r5qUU1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| NB [auth MM] | e6r5qMM1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| MB [auth QQ] | e6r5qQQ1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| LB [auth RR] | e6r5qRR1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| KB [auth EE] | e6r5qEE1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| JB [auth SS] | e6r5qSS1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| IB [auth DD] | e6r5qDD1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| HB [auth CC] | e6r5qCC1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| GB [auth BB] | e6r5qBB1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| FB [auth z] | e6r5qz1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| EB [auth y] | e6r5qy1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| DB [auth x] | e6r5qx1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| CB [auth w] | e6r5qw1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| BB [auth v] | e6r5qv1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| AB [auth u] | e6r5qu1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| ZA [auth q] | e6r5qq1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| XA [auth t] | e6r5qt1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| WA [auth s] | e6r5qs1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| VA [auth r] | e6r5qr1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| UA [auth p] | e6r5qp1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| TA [auth o] | e6r5qo1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| SA [auth n] | e6r5qn1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| RA [auth m] | e6r5qm1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| QA [auth l] | e6r5ql1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| PA [auth k] | e6r5qk1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| OA [auth j] | e6r5qj1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| NA [auth i] | e6r5qi1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| MA [auth h] | e6r5qh1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| LA [auth g] | e6r5qg1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| KA [auth f] | e6r5qf1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| JA [auth e] | e6r5qe1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| IA [auth d] | e6r5qd1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| HA [auth c] | e6r5qc1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| GA [auth b] | e6r5qb1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| FA [auth a] | e6r5qa1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| EA [auth Z] | e6r5qZ1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| DA [auth Y] | e6r5qY1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| BA [auth W] | e6r5qW1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| AA [auth V] | e6r5qV1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| Z [auth U] | e6r5qU1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| Y [auth T] | e6r5qT1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| X [auth S] | e6r5qS1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| W [auth R] | e6r5qR1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| U [auth P] | e6r5qP1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| T [auth O] | e6r5qO1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| S [auth N] | e6r5qN1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| R [auth M] | e6r5qM1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| P [auth J] | e6r5qJ1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| O [auth I] | e6r5qI1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| L [auth F] | e6r5qF1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| K [auth E] | e6r5qE1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) | |
| J [auth D] | e6r5qD1 | A: Ten stranded beta/alpha barrel | X: Ten stranded beta/alpha barrel | H: Ten stranded beta/alpha barrel | T: | F: | ECOD (20:10:01) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| M [auth G] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| N [auth H] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| N [auth H] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| Q [auth L] | PF00832 | Ribosomal L39 protein (Ribosomal_L39) | Ribosomal L39 protein | - | Family |
| V [auth Q] | PF17135 | Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18) | Ribosomal protein 60S L18 and 50S L18e | - | Family |
| CA [auth X] | PF00900 | Ribosomal family S4e (Ribosomal_S4e) | Ribosomal family S4e | - | Family |
| CA [auth X] | PF03939 | Ribosomal protein L23, N-terminal domain (Ribosomal_L23eN) | Ribosomal protein L23, N-terminal domain | - | Family |
| CA [auth X] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| OB [auth WW] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | Domain | |
| GC [auth AA] | PF04758 | Ribosomal protein S30 (Ribosomal_S30) | Ribosomal protein S30 | - | Family |
| I [auth C] | PF14374 | 60S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C) | 60S ribosomal protein L4 C-terminal domain | This family is found at the very C-terminal of 60 ribosomal L4 proteins. | Domain |
| I [auth C] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| I [auth C] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| FC [auth 6] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| EC [auth 0] | PF01599 | Ribosomal protein S27a (Ribosomal_S27) | Ribosomal protein S27a | This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ... | Domain |
| CC [auth 9] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| BC [auth FF] | PF01200 | Ribosomal protein S28e (Ribosomal_S28e) | Ribosomal protein S28e | Domain | |
| H [auth B] | PF01779 | Ribosomal L29e protein family (Ribosomal_L29e) | Ribosomal L29e protein family | - | Family |
| H [auth B] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| AC [auth JJ] | PF01667 | Ribosomal protein S27 (Ribosomal_S27e) | Ribosomal protein S27 | - | Family |
| YB [auth OO] | PF03297 | S25 ribosomal protein (Ribosomal_S25) | S25 ribosomal protein | - | Family |
| WB [auth VV] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| VB [auth TT] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| SB [auth PP] | PF01090 | Ribosomal protein S19e (Ribosomal_S19e) | Ribosomal protein S19e | - | Family |
| RB [auth II] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| G [auth A] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| G [auth A] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| G [auth A] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| QB [auth KK] | PF00833 | Ribosomal S17 (Ribosomal_S17e) | Ribosomal S17 | - | Family |
| PB [auth UU] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| NB [auth MM] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| MB [auth QQ] | PF08069 | Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N) | Ribosomal S13/S15 N-terminal domain | This domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1]. | Domain |
| MB [auth QQ] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| LB [auth RR] | PF01248 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family | This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ... | Domain |
| KB [auth EE] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| KB [auth EE] | PF16205 | Ribosomal_S17 N-terminal (Ribosomal_S17_N) | Ribosomal_S17 N-terminal | - | Family |
| JB [auth SS] | PF03501 | Plectin/S10 domain (S10_plectin) | Plectin/S10 domain | This presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding. | Domain |
| IB [auth DD] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| IB [auth DD] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| HB [auth CC] | PF01201 | Ribosomal protein S8e (Ribosomal_S8e) | Ribosomal protein S8e | - | Family |
| GB [auth BB] | PF01251 | Ribosomal protein S7e (Ribosomal_S7e) | Ribosomal protein S7e | - | Family |
| EA [auth Z] | PF01777 | Ribosomal L27e protein family (Ribosomal_L27e) | Ribosomal L27e protein family | - | Family |
| EA [auth Z] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| DA [auth Y] | PF16906 | Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26) | Ribosomal proteins L26 eukaryotic, L24P archaeal | - | Family |
| DA [auth Y] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| DA [auth Y] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| BA [auth W] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| BA [auth W] | PF01246 | Ribosomal protein L24e (Ribosomal_L24e) | Ribosomal protein L24e | Domain | |
| BA [auth W] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| AA [auth V] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| Z [auth U] | PF01015 | Ribosomal S3Ae family (Ribosomal_S3Ae) | Ribosomal S3Ae family | - | Family |
| Y [auth T] | PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain |
| Y [auth T] | PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | Domain | |
| Y [auth T] | PF01157 | Ribosomal protein L21e (Ribosomal_L21e) | Ribosomal protein L21e | - | Family |
| W [auth R] | PF01778 | Ribosomal L28e protein family (Ribosomal_L28e) | Ribosomal L28e protein family | - | Family |
| U [auth P] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| U [auth P] | PF01780 | Ribosomal L37ae protein family (Ribosomal_L37ae) | Ribosomal L37ae protein family | - | Family |
| T [auth O] | PF00935 | Ribosomal protein L44 (Ribosomal_L44) | Ribosomal protein L44 | - | Family |
| S [auth N] | PF00827 | Ribosomal L15 (Ribosomal_L15e) | Ribosomal L15 | - | Family |
| R [auth M] | PF01929 | Ribosomal protein L14 (Ribosomal_L14e) | Ribosomal protein L14 | - | Family |
| P [auth J] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| P [auth J] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| O [auth I] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| O [auth I] | PF01158 | Ribosomal protein L36e (Ribosomal_L36e) | Ribosomal protein L36e | - | Family |
| L [auth F] | PF08079 | Ribosomal L30 N-terminal domain (Ribosomal_L30_N) | Ribosomal L30 N-terminal domain | This presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. | Domain |
| L [auth F] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| K [auth E] | PF03868 | Ribosomal protein L6, N-terminal domain (Ribosomal_L6e_N) | Ribosomal protein L6, N-terminal domain | Domain | |
| K [auth E] | PF01159 | Ribosomal protein L6e (Ribosomal_L6e) | Ribosomal protein L6e | - | Family |
| J [auth D] | PF17144 | Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e) | Ribosomal large subunit proteins 60S L5, and 50S L18 | - | Family |
| J [auth D] | PF01198 | Ribosomal protein L31e (Ribosomal_L31e) | Ribosomal protein L31e | - | Family |
| J [auth D] | PF14204 | Ribosomal L18 C-terminal region (Ribosomal_L18_c) | Ribosomal L18 C-terminal region | This domain is the C-terminal end of ribosomal L18/L5 proteins. | Domain |














