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 6S5W | pdb_00006s5w

Structure of Rib domain 'Rib Long' from Lactobacillus acidophilus

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BRibonuc_L-PSPe6s5wB1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: Ribonuc_L-PSPECOD (v295.2)
ARibLonge6s5wA1 A: alpha arraysX: Nat/IvyH: Acyl-CoA N-acyltransferases (Nat)T: Acyl-CoA N-acyltransferases (Nat)F: RibLongECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF18957Long Rib domain (RibLong)Long Rib domainThis entry represents the Long Rib domain that is closely related to the Pfam:PF08428 Rib domain but has a conserved insertion. These domains are found in bacterial cell surface proteins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Surface protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR059115Rib domainDomain
A, B
IPR015919Cadherin-like superfamilyHomologous Superfamily
A, B
IPR046776Putative pectate lyase-like adhesive domainRepeat
A, B
IPR013783Immunoglobulin-like foldHomologous Superfamily
A, B
IPR044055Long Rib domainDomain
A, B
IPR012706Rib/alpha/Esp surface antigen repeatRepeat