Molecular basis for tumor infiltrating TCR recognition of hotspot KRAS-G12D mutation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| I [auth E] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
| F [auth B] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8003766 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I [auth E] | RNase_P_p30 | e6uonE1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: RNase_P_p30 | ECOD (v294.1) |
| F [auth B] | RNase_P_p30 | e6uonB1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: RNase_P_p30 | ECOD (v294.1) |
| H [auth D] | RNase_P_p30 | e6uonD1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: RNase_P_p30 | ECOD (v294.1) |
| E [auth A] | RNase_P_p30 | e6uonA1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: RNase_P_p30 | ECOD (v294.1) |
| D [auth J] | RNase_P_p30 | e6uonJ1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: RNase_P_p30 | ECOD (v294.1) |
| B [auth H] | RNase_P_p30 | e6uonH1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: RNase_P_p30 | ECOD (v294.1) |
| C [auth I] | RNase_P_p30 | e6uonI1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: RNase_P_p30 | ECOD (v294.1) |
| A [auth G] | RNase_P_p30 | e6uonG1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | F: RNase_P_p30 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| I [auth E] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| F [auth B] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| H [auth D] | 3.30.500.10 | Alpha Beta | 2-Layer Sandwich | Murine Class I Major Histocompatibility Complex, H2-DB | Chain A, domain 1 | CATH (utative) |
| H [auth D] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| E [auth A] | 3.30.500.10 | Alpha Beta | 2-Layer Sandwich | Murine Class I Major Histocompatibility Complex, H2-DB | Chain A, domain 1 | CATH (utative) |
| E [auth A] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| D [auth J] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| B [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| F [auth B], I [auth E] | - | B2M | - | B2M*01, B2M*02 | C-LIKE-DOMAIN C-LIKE | MH | MH1-ALPHA_B2M | IMGT (202614-0) |
| E [auth A], H [auth D] | - | I-ALPHA | - | HLA-C*0801, HLA-C*0802, HLA-C*0803, HLA-C*0809, HLA-C*0815, HLA-C*0824, HLA-C*0822, HLA-C*0827, HLA-C*0820, HLA-C*0831 | G-DOMAIN G-ALPHA1, G-DOMAIN G-ALPHA2, C-LIKE-DOMAIN C-LIKE | MH | MH1-ALPHA_B2M | IMGT (202614-0) |
| B [auth H], D [auth J] | TCR-V-ALPHA-12-02*01,H, J | TR-BETA-2 | - | TRBV10-2*01, TRBV10-2*02, TRBJ1-1*01, TRBC2*01, TRBC2*02 | V-DOMAIN V-BETA, C-DOMAIN C-BETA-2 | TR | TR-ALPHA_BETA-2 | IMGT (202614-0) |
| A [auth G], C [auth I] | TCR-V-ALPHA-12-02*01,H, J | TR-ALPHA | - | TRAV12-2*01, TRAJ12*01, TRAC*01 | V-DOMAIN V-ALPHA, C-DOMAIN C-ALPHA | TR | TR-ALPHA_BETA-2 | IMGT (202614-0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| F [auth B], I [auth E] | PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain | |














