6V35
Cryo-EM structure of Ca2+-free hsSlo1-beta4 channel complex
External Resource: Annotation
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ion_trans_2 | e6v35A2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans_2 | ECOD (1.6) |
A | BK_channel_a | e6v35A1 | A: a+b two layers | X: TrkA C-terminal domain-like (From Topology) | H: TrkA C-terminal domain-like (From Topology) | T: TrkA C-terminal domain-like | F: BK_channel_a | ECOD (1.6) |
A | KOG1420 | e6v35A4 | A: a+b two layers | X: TrkA C-terminal domain-like (From Topology) | H: TrkA C-terminal domain-like (From Topology) | T: TrkA C-terminal domain-like | F: KOG1420 | ECOD (1.6) |
A | TrkA_N_1 | e6v35A3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: TrkA_N_1 | ECOD (1.6) |
C [auth B] | Ion_trans_2 | e6v35B1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans_2 | ECOD (1.6) |
C [auth B] | BK_channel_a | e6v35B3 | A: a+b two layers | X: TrkA C-terminal domain-like (From Topology) | H: TrkA C-terminal domain-like (From Topology) | T: TrkA C-terminal domain-like | F: BK_channel_a | ECOD (1.6) |
C [auth B] | KOG1420 | e6v35B4 | A: a+b two layers | X: TrkA C-terminal domain-like (From Topology) | H: TrkA C-terminal domain-like (From Topology) | T: TrkA C-terminal domain-like | F: KOG1420 | ECOD (1.6) |
C [auth B] | TrkA_N_1 | e6v35B2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: TrkA_N_1 | ECOD (1.6) |
E [auth C] | Ion_trans_2 | e6v35C3 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans_2 | ECOD (1.6) |
E [auth C] | BK_channel_a | e6v35C5 | A: a+b two layers | X: TrkA C-terminal domain-like (From Topology) | H: TrkA C-terminal domain-like (From Topology) | T: TrkA C-terminal domain-like | F: BK_channel_a | ECOD (1.6) |
E [auth C] | KOG1420 | e6v35C4 | A: a+b two layers | X: TrkA C-terminal domain-like (From Topology) | H: TrkA C-terminal domain-like (From Topology) | T: TrkA C-terminal domain-like | F: KOG1420 | ECOD (1.6) |
E [auth C] | TrkA_N_1 | e6v35C1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: TrkA_N_1 | ECOD (1.6) |
G [auth D] | Ion_trans_2 | e6v35D2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: Ion_trans_2 | ECOD (1.6) |
G [auth D] | BK_channel_a | e6v35D5 | A: a+b two layers | X: TrkA C-terminal domain-like (From Topology) | H: TrkA C-terminal domain-like (From Topology) | T: TrkA C-terminal domain-like | F: BK_channel_a | ECOD (1.6) |
G [auth D] | KOG1420 | e6v35D4 | A: a+b two layers | X: TrkA C-terminal domain-like (From Topology) | H: TrkA C-terminal domain-like (From Topology) | T: TrkA C-terminal domain-like | F: KOG1420 | ECOD (1.6) |
G [auth D] | TrkA_N_1 | e6v35D3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: TrkA_N_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B], E [auth C], G [auth D] | PF21014 | Ca2+-activated K+ channel Slowpoke, TrkA_C like domain (Slowpoke_C) | Ca2+-activated K+ channel Slowpoke, TrkA_C like domain | This domain is found at the cytoplasmic C-terminus of the drosophila slowpoke K+ channel. It is related to the TrkA C-terminal domain Pfam:PF02080. | Domain |
A, C [auth B], E [auth C], G [auth D] | PF03493 | Calcium-activated BK potassium channel alpha subunit (BK_channel_a) | Calcium-activated BK potassium channel alpha subunit | - | Family |
A, C [auth B], E [auth C], G [auth D] | PF07885 | Ion channel (Ion_trans_2) | Ion channel | - | Family |
A, C [auth B], E [auth C], G [auth D] | PF00520 | Ion transport protein (Ion_trans) | Ion transport protein | - | Family |
A, C [auth B], E [auth C], G [auth D] | PF22614 | Calcium-activated potassium channel slowpoke-like RCK domain (Slo-like_RCK) | Calcium-activated potassium channel slowpoke-like RCK domain | This entry includes calcium-activated potassium channels, known as BK channels or Slowpoke homologues (Slo1-3) which includes calcium-activated potassium channel slowpoke from Drosophila (Slo) and its homologues from vertebrates KCMA1, KCNT1/2 and KC ... | Domain |
B [auth E], D [auth F], F [auth G], H | PF03185 | Calcium-activated potassium channel, beta subunit (CaKB) | Calcium-activated potassium channel, beta subunit | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Slo potassium channels |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |