Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF02460Patched SSD (Patched)Patched SSDThe transmembrane protein Patched Swiss:P18502 is a receptor for the morphogenic Sonic Hedgehog. This protein associates with the smoothened protein (SMO) to transduce hedgehog signals. These proteins consist of twelve transmembrane segments and two ...The transmembrane protein Patched Swiss:P18502 is a receptor for the morphogenic Sonic Hedgehog. This protein associates with the smoothened protein (SMO) to transduce hedgehog signals. These proteins consist of twelve transmembrane segments and two extracellular domains (ECDs) [1,2]. This entry represents the Sterol-sensing domain (SSD) formed by some of the TM segments. This domain may play a role in the transport and/or regulation of the SMO ligand [2].
Domain
PF16414Niemann-Pick C1 N terminus (NPC1_N)Niemann-Pick C1 N terminusThis is the N-terminal domain of Niemann-Pick C1 family proteins. This family of proteins mediates transport of cholesterol from the intestinal lumen to enterocytes. This domain contains a cholesterol-binding pocket [1-2]. Domain
PF22314NPC1, middle luminal domain (NPC1_MLD)NPC1, middle luminal domainNPC intracellular cholesterol transporter 1 (NPC1) is a endosomal/lysosomal membrane protein that facilitates the trafficking of cholesterol and other cargo from lysosomes and is involved in cholesterol homeostasis. Mutations in the NPC1 gene cause t ...NPC intracellular cholesterol transporter 1 (NPC1) is a endosomal/lysosomal membrane protein that facilitates the trafficking of cholesterol and other cargo from lysosomes and is involved in cholesterol homeostasis. Mutations in the NPC1 gene cause the rare neurodegenerative disease Niemann-Pick Type C (NPC). This entry represents the middle luminal domain (MLD) of NPC1, which contains the Ebola glycoprotein interacting site [5].
Domain
PF12349Sterol-sensing domain of SREBP cleavage-activation (Sterol-sensing)Sterol-sensing domain of SREBP cleavage-activation- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
NPC1-like intracellular cholesterol transporter 1