Annotations: 6V85

Parainfluenza virus 5 L-P complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	G-alpha	e6v85A1	A: beta barrels	X: DNA methylase specificity domain	H: Bromodomain	T: Bromodomain	F: G-alpha	ECOD (v294.2)
A	zf-CCHC	e6v85A6	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: zf-CCHC	ECOD (v294.2)
B [auth F]	Chlor_dismutase	e6v85F1	A: beta barrels	X: Family A G protein-coupled receptor-like	H: beta-sandwich domain in metalloprotease stcE	T: beta-sandwich domain in metalloprotease stcE	F: Chlor_dismutase	ECOD (v294.2)
C [auth B]	MIF4G	e6v85B1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
D [auth C]	MIF4G	e6v85C1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
E [auth D]	MIF4G	e6v85D1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
F [auth E]	MIF4G	e6v85E1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF14318	Mononegavirales mRNA-capping region V (Mononeg_mRNAcap)	Mononegavirales mRNA-capping region V	This V domain of L RNA-polymerase carries a new motif, GxxTx(n)HR, that is essential for mRNA cap formation. Nonsegmented negative-sense (NNS) RNA viruses, Mononegavirales, cap their mRNA by an unconventional mechanism. Specifically, 5'-monophosphate ...	This V domain of L RNA-polymerase carries a new motif, GxxTx(n)HR, that is essential for mRNA cap formation. Nonsegmented negative-sense (NNS) RNA viruses, Mononegavirales, cap their mRNA by an unconventional mechanism. Specifically, 5'-monophosphate mRNA is transferred to GDP derived from GTP through a reaction that involves a covalent intermediate between the large polymerase protein L and mRNA. The V region is essential for this process [1].	Domain
A	PF00946	Mononegavirales RNA dependent RNA polymerase (Mononeg_RNA_pol)	Mononegavirales RNA dependent RNA polymerase	-	Family
B [auth F], C [auth B], D [auth C], E [auth D], F [auth E]	PF03210	Paramyxovirus P/V phosphoprotein C-terminal (Paramyx_P_V_C)	Paramyxovirus P/V phosphoprotein C-terminal	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	RNA-directed RNA polymerase L	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups RNA methyltransferase activity transferase activity, transferring one-carbon groups S-adenosylmethionine-dependent methyltransferase activity mRNA 5'-cap (guanine-N7-)-methyltransferase activity N-methyltransferase activity methyltransferase activity mRNA methyltransferase activity pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides	-	virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part
B [auth F], C [auth B], D [auth C], E [auth D], F [auth E]	Phosphoprotein	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR014023	Mononegavirales RNA-directed RNA polymerase catalytic domain	Domain
A	IPR025786	Mononegavirus L protein 2-O-ribose methyltransferase	Domain
A	IPR039736	RNA-directed RNA polymerase L, C-terminal	Domain
A	IPR026890	Mononegavirales mRNA-capping domain V	Domain
A	IPR016269	RNA-directed RNA polymerase, paramyxovirus	Family
B [auth F], C [auth B], D [auth C], E [auth D], F [auth E]	IPR025909	Phosphoprotein P soyouz module	Domain
B [auth F], C [auth B], D [auth C], E [auth D], F [auth E]	IPR004897	P/V phosphoprotein, paramyxoviral	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6V85 | pdb_00006v85

Parainfluenza virus 5 L-P complex

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage