6VR7
Structure of a pseudomurein peptide ligase type C from Methanothermus fervidus
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Pyr_redox | e6vr7A3 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: MurCD/PglD N-terminal domain-like | F: Pyr_redox | ECOD (1.6) |
A | Mur_ligase_M | e6vr7A1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Mur_ligase_M | ECOD (1.6) |
A | Mur_ligase_C | e6vr7A2 | A: a/b three-layered sandwiches | X: MurD-like peptide ligases, peptide-binding domain (From Topology) | H: MurD-like peptide ligases, peptide-binding domain (From Topology) | T: MurD-like peptide ligases, peptide-binding domain | F: Mur_ligase_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.720 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | NAD(P)-binding Rossmann-like Domain | CATH (utative) |
A | 3.90.190.20 | Alpha Beta | Alpha-Beta Complex | Protein-Tyrosine Phosphatase | Chain A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08245 | Mur ligase middle domain (Mur_ligase_M) | Mur ligase middle domain | Domain | ||
PF02875 | Mur ligase, glutamate ligase domain (Mur_ligase_C) | Mur ligase, glutamate ligase domain | This entry contains a number of related ligase enzymes which have EC numbers 6.3.2.* which includes: MurC (Swiss:P17952), MurD (Swiss:P14900), MurE (Swiss:P22188), MurF (Swiss:P11880), Mpl (Swiss:P37773) and FolC (Swiss:P08192). MurC, MurD, MurE and ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Mur ligase middle domain protein |
| - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036615 | Mur ligase, C-terminal domain superfamily | Homologous Superfamily | |
IPR004101 | Mur ligase, C-terminal | Domain | |
IPR013221 | Mur ligase, central | Domain | |
IPR036565 | Mur-like, catalytic domain superfamily | Homologous Superfamily | |
IPR018109 | Folylpolyglutamate synthetase, conserved site | Conserved Site |