6WBX | pdb_00006wbx

Single-Particle Cryo-EM Structure of Arabinofuranosyltransferase AftD from Mycobacteria, Mutant R1389S Class 1

External Resource: Annotation


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF11847Alpha-(1->3)-arabinofuranosyltransferase, N-terminal GT-C domain (GT-C_AftD)Alpha-(1->3)-arabinofuranosyltransferase, N-terminal GT-C domain- Family
PF24607Arabinofuranosyltransferase D, third carbohydrate binding module (CBM_AftD)Arabinofuranosyltransferase D, third carbohydrate binding moduleThis is the third carbohydrate binding module (CBM) found in Arabinofuranosyltransferase D from Mycolicibacterium smegmatis (AftD) and similar proteins from actinomycetes. AftD is made up of five distinct domains: a domain of mixed alpha/beta folds ( ...This is the third carbohydrate binding module (CBM) found in Arabinofuranosyltransferase D from Mycolicibacterium smegmatis (AftD) and similar proteins from actinomycetes. AftD is made up of five distinct domains: a domain of mixed alpha/beta folds (Pfam:PF11847) three CBMs and one structural beta-sandwich domain [1,2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DUF3367 domain-containing protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR000421Coagulation factor 5/8, C-terminal domainDomain
IPR056997Arabinofuranosyltransferase D, third carbohydrate binding moduleDomain
IPR008979Galactose-binding-like domain superfamilyHomologous Superfamily
IPR021798Alpha-(1->3)-arabinofuranosyltransferase, N-terminal GT-C domainDomain

Membrane Protein Annotation: OPM OPM Database Homepage

ChainsExternal LinkTypeClassSuperfamilyFamily
OPMTransmembraneAlpha-helical polytopicGlycosyl transferase/transporterAlpha-arabinofuranosyltransferase

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
PDBTMAnnotated as membrane protein by PDBTM