Structure of Hepatitis C Virus Envelope Glycoprotein E2 core from genotype 1a bound to neutralizing antibody HC1AM and non neutralizing antibody E1
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| J [auth H] | e6woqH1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295.2) | |
| E [auth K] | Sec1 | e6woqK1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: Sec1 | ECOD (v295.2) |
| I [auth G] | Sec1 | e6woqG1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: Sec1 | ECOD (v295.2) |
| D [auth J] | e6woqJ1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295.2) | |
| H [auth F] | e6woqF1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295.2) | |
| C [auth E] | e6woqE1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295.2) | |
| G [auth D] | e6woqD1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295.2) | |
| B | e6woqB1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295.2) | |
| F [auth C] | e6woqC1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295.2) | |
| A | e6woqA1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| J [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| E [auth K] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| I [auth G] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| D [auth J] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| G [auth D] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| F [auth C] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| E [auth K], J [auth H] | Fab HC1AM | L-KAPPA | Homo sapiens (human) | IGKV3-20*01, IGKJ2*01, IGKJ2*02, IGKC*01 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-1_KAPPA | IMGT (202640-0) |
| D [auth J], I [auth G] | Fab HC1AM | VH-CH1 | Homo sapiens (human) | IGHV1-69*17, IGHJ1*01, IGHJ4*01, IGHJ5*01, IGHJ4*02, IGHJ4*03, IGHG1*01, IGHG1*02, IGHG1*04, IGHG1*05, IGHG1*12, IGHG1*14, IGHG1*13, IGHG1*09, IGHG1*10, IGHG1*07, IGHG1*11 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_KAPPA | IMGT (202640-0) |
| B, G [auth D] | Fab E1, anti-HCV E2, neutralizing | L-KAPPA | Homo sapiens (human) | IGKV2-30*01, IGKJ4*01, IGKJ4*02, IGKC*01 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-1_KAPPA | IMGT (202640-0) |
| A, F [auth C] | Fab E1, anti-HCV E2, neutralizing | VH-CH1 | Homo sapiens (human) | IGHV1-69*02, IGHJ1*01, IGHJ4*01, IGHJ5*01, IGHJ5*02, IGHJ4*02, IGHJ4*03, IGHG1*01, IGHG1*02, IGHG1*04, IGHG1*05, IGHG1*12, IGHG1*14, IGHG1*13, IGHG1*09, IGHG1*10, IGHG1*07, IGHG1*11 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_KAPPA | IMGT (202640-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| E [auth K], J [auth H] | Light Chain | IGKV3 | Kappa | envelope glycoprotein e2 | SAbDab (2026-10-16) |
| D [auth J], I [auth G] | Heavy Chain | IGHV1 | - | envelope glycoprotein e2 | SAbDab (2026-10-16) |
| B, G [auth D] | Light Chain | IGKV2 | Kappa | envelope glycoprotein e2 | SAbDab (2026-10-16) |
| A, F [auth C] | Heavy Chain | IGHV1 | - | envelope glycoprotein e2 | SAbDab (2026-10-16) |