6X0N
Bridging of double-strand DNA break activates PARP2/HPF1 to modify chromatin
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
K [auth a] | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
O [auth e] | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
L [auth b] | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
P [auth f] | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
M [auth c] | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
Q [auth g] | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
N [auth d] | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
R [auth h] | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
V [auth P] | SCOP2B Superfamily | WGR domain-like | 8074102 | 3000760 | SCOP2B (2022-06-29) |
W [auth R] | SCOP2B Superfamily | WGR domain-like | 8074102 | 3000760 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Histone | e6x0nA1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
E | Histone | e6x0nE1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
K [auth a] | Histone | e6x0na1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
O [auth e] | Histone | e6x0ne1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
B | Histone_1 | e6x0nB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
F | Histone_1 | e6x0nF1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
L [auth b] | Histone_1 | e6x0nb1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
P [auth f] | Histone_1 | e6x0nf1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
C | Histone_1 | e6x0nC1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
G | Histone_1 | e6x0nG1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
M [auth c] | Histone_1 | e6x0nc1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
Q [auth g] | Histone_1 | e6x0ng1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone_1 | ECOD (1.6) |
D | Histone | e6x0nD1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
H | Histone | e6x0nH1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
N [auth d] | Histone | e6x0nd1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
R [auth h] | Histone | e6x0nh1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: Histone | ECOD (1.6) |
V [auth P] | PARP_reg | e6x0nP3 | A: alpha bundles | X: Domain of poly(ADP-ribose) polymerase (From Topology) | H: Domain of poly(ADP-ribose) polymerase (From Topology) | T: Domain of poly(ADP-ribose) polymerase | F: PARP_reg | ECOD (1.6) |
V [auth P] | WGR | e6x0nP2 | A: a+b two layers | X: WGR domain (From Topology) | H: WGR domain (From Topology) | T: WGR domain | F: WGR | ECOD (1.6) |
V [auth P] | PARP | e6x0nP1 | A: a+b complex topology | X: ADP-ribosylation (From Topology) | H: ADP-ribosylation (From Topology) | T: ADP-ribosylation | F: PARP | ECOD (1.6) |
W [auth R] | WGR | e6x0nR1 | A: a+b two layers | X: WGR domain (From Topology) | H: WGR domain (From Topology) | T: WGR domain | F: WGR | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B, F, L [auth b], P [auth f] | PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain |
C, G, M [auth c], Q [auth g] | PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family |
U [auth O] | PF10228 | Histone PARylation factor 1 (HPF1) | Histone PARylation factor 1 | - | Family |
V [auth P], W [auth R] | PF00644 | Poly(ADP-ribose) polymerase catalytic domain (PARP) | Poly(ADP-ribose) polymerase catalytic domain | - | Family |
V [auth P], W [auth R] | PF02877 | Poly(ADP-ribose) polymerase, regulatory domain (PARP_reg) | Poly(ADP-ribose) polymerase, regulatory domain | Poly(ADP-ribose) polymerase catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component ... | Domain |
V [auth P], W [auth R] | PF05406 | WGR domain (WGR) | WGR domain | This domain is found in a variety of polyA polymerases as well as the E. coli molybdate metabolism regulator Swiss:P33345 and other proteins of unknown function. I have called this domain WGR after the most conserved central motif of the domain. The ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
U [auth O] | Q9NWY4 | : |
V [auth P], W [auth R] | Q9UGN5 | :