6X66 | pdb_00006x66

Legionella pneumophila dDot T4SS OMC


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
MD [auth QA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
LD [auth LA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
KD [auth KA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
JD [auth JA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
ID [auth IA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
HD [auth HA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
GD [auth GA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
FD [auth FA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
ED [auth EA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
DD [auth DA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
CD [auth CA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
BD [auth BA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
AD [auth AA]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
ZA [auth GK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
XB [auth JK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
VC [auth MK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
T [auth CK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
RA [auth FK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
PB [auth IK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
NC [auth LK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
L [auth BK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
JA [auth EK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
HB [auth HK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
FC [auth KK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
D [auth AK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
BA [auth DK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
MD [auth QA]GAFe6x66QA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
LD [auth LA]GAFe6x66LA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
KD [auth KA]GAFe6x66KA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
JD [auth JA]GAFe6x66JA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
ID [auth IA]GAFe6x66IA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
HD [auth HA]GAFe6x66HA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
GD [auth GA]GAFe6x66GA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
FD [auth FA]GAFe6x66FA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
ED [auth EA]GAFe6x66EA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
DD [auth DA]GAFe6x66DA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
CD [auth CA]GAFe6x66CA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
BD [auth BA]GAFe6x66BA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
AD [auth AA]GAFe6x66AA1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
ZA [auth GK]GAFe6x66GK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
XB [auth JK]GAFe6x66JK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
VC [auth MK]GAFe6x66MK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
T [auth CK]GAFe6x66CK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
RA [auth FK]GAFe6x66FK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
PB [auth IK]GAFe6x66IK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
NC [auth LK]GAFe6x66LK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
L [auth BK]GAFe6x66BK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
JA [auth EK]GAFe6x66EK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
HB [auth HK]GAFe6x66HK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
FC [auth KK]GAFe6x66KK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
D [auth AK]GAFe6x66AK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
BA [auth DK]GAFe6x66DK1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: GAFECOD (v294.2)
ZC [auth Md]MIF4Ge6x66Md1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
Z [auth DD]MIF4Ge6x66DD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
XA [auth GD]MIF4Ge6x66GD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
X [auth Cd]MIF4Ge6x66Cd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
VB [auth JD]MIF4Ge6x66JD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
VA [auth Fd]MIF4Ge6x66Fd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
TC [auth MD]MIF4Ge6x66MD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
TB [auth Id]MIF4Ge6x66Id1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
RC [auth Ld]MIF4Ge6x66Ld1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
R [auth CD]MIF4Ge6x66CD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
PA [auth FD]MIF4Ge6x66FD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
P [auth Bd]MIF4Ge6x66Bd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
NB [auth ID]MIF4Ge6x66ID1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
NA [auth Ed]MIF4Ge6x66Ed1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
LC [auth LD]MIF4Ge6x66LD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
LB [auth Hd]MIF4Ge6x66Hd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
JC [auth Kd]MIF4Ge6x66Kd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
J [auth BD]MIF4Ge6x66BD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
HA [auth ED]MIF4Ge6x66ED1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
H [auth Ad]MIF4Ge6x66Ad1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
FB [auth HD]MIF4Ge6x66HD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
FA [auth Dd]MIF4Ge6x66Dd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
DC [auth KD]MIF4Ge6x66KD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
DB [auth Gd]MIF4Ge6x66Gd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
BC [auth Jd]MIF4Ge6x66Jd1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)
B [auth AD]MIF4Ge6x66AD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: MIF4GECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Outer membrane protein, OmpA family protein- -
Type IV secretion system unknown protein fragment---
Inner membrane lipoprotein YiaD- -
Type IV secretion protein IcmK---
DotD- - -
DotC- - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR006665OmpA-like domainDomain
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
IPR036737OmpA-like domain superfamilyHomologous Superfamily
IPR006665OmpA-like domainDomain
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
IPR036737OmpA-like domain superfamilyHomologous Superfamily
IPR038140DotD superfamilyHomologous Superfamily
IPR031817DotD proteinFamily
IPR031618Putative type IV secretory system proteinFamily