6X9C
Structure of proline utilization A with L-proline bound in the L-glutamate-gamma-semialdehyde dehydrogenase active site
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Pro_dh | e6x9cA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Pro_dh | ECOD (1.6) |
A | F_UNCLASSIFIED | e6x9cA3 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A | Aldedh_2nd | e6x9cA5 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: Aldedh_2nd | ECOD (1.6) |
A | Aldedh_1st_1 | e6x9cA4 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: Aldedh_1st_1 | ECOD (1.6) |
A | putA_2nd,Pro_dh-DNA_bdg | e6x9cA1 | A: extended segments | X: N-terminal domain of bifunctional PutA protein (From Topology) | H: N-terminal domain of bifunctional PutA protein (From Topology) | T: N-terminal domain of bifunctional PutA protein | F: putA_2nd,Pro_dh-DNA_bdg | ECOD (1.6) |
B | Pro_dh | e6x9cB3 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: Pro_dh | ECOD (1.6) |
B | F_UNCLASSIFIED | e6x9cB5 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | Aldedh_2nd | e6x9cB2 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: Aldedh_2nd | ECOD (1.6) |
B | Aldedh_1st_1 | e6x9cB1 | A: a/b three-layered sandwiches | X: ALDH-like (From Topology) | H: ALDH-like (From Topology) | T: ALDH-like | F: Aldedh_1st_1 | ECOD (1.6) |
B | putA_2nd,Pro_dh-DNA_bdg | e6x9cB4 | A: extended segments | X: N-terminal domain of bifunctional PutA protein (From Topology) | H: N-terminal domain of bifunctional PutA protein (From Topology) | T: N-terminal domain of bifunctional PutA protein | F: putA_2nd,Pro_dh-DNA_bdg | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00171 | Aldehyde dehydrogenase family (Aldedh) | Aldehyde dehydrogenase family | - | Family | |
PF01619 | Proline dehydrogenase (Pro_dh) | Proline dehydrogenase | - | Family | |
PF18327 | Proline utilization A proline dehydrogenase N-terminal domain (PRODH) | Proline utilization A proline dehydrogenase N-terminal domain | This is the N-terminal domain found in Proline utilization A (PutA) proteins. Proline utilization A (PutA) is a flavoprotein that has mutually exclusive roles as a transcriptional repressor of the put regulon and a membrane-associated enzyme that cat ... | Domain | |
PF14850 | DNA-binding domain of Proline dehydrogenase (Pro_dh-DNA_bdg) | DNA-binding domain of Proline dehydrogenase | This domain lies at the N-terminus of bifunctional proline-dehydrogenases and is found to bind DNA. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002872 | Proline dehydrogenase domain | Domain | |
IPR015590 | Aldehyde dehydrogenase domain | Domain | |
IPR016161 | Aldehyde/histidinol dehydrogenase | Homologous Superfamily | |
IPR029041 | FAD-linked oxidoreductase-like | Homologous Superfamily | |
IPR016162 | Aldehyde dehydrogenase, N-terminal | Homologous Superfamily | |
IPR041349 | Proline utilization A proline dehydrogenase N-terminal domain | Domain | |
IPR050485 | Proline metabolism enzyme | Family | |
IPR025703 | Bifunctional protein PutA | Family | |
IPR024090 | Proline dehydrogenase PutA, domain I | Homologous Superfamily | |
IPR024089 | Proline dehydrogenase PutA, domain I/II | Homologous Superfamily | |
IPR016163 | Aldehyde dehydrogenase, C-terminal | Homologous Superfamily | |
IPR016160 | Aldehyde dehydrogenase, cysteine active site | Conserved Site | |
IPR005933 | Bifunctional protein PutA, C-terminal domain | Domain | |
IPR024082 | Proline dehydrogenase PutA, domain II | Domain |